Pairwise Alignments

Query, 387 a.a., benzoate transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., Inner membrane protein YdcO from Acinetobacter radioresistens SK82

 Score =  248 bits (632), Expect = 3e-70
 Identities = 138/382 (36%), Positives = 212/382 (55%), Gaps = 1/382 (0%)

Query: 2   MKGFFNLSHLSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILY 61
           +K  +++S   AGF  VL+ Y+  ++I  QAA  +  +   + SW+  + +   +  I  
Sbjct: 8   LKADWSISATVAGFLAVLISYSGPLIIFFQAAQQANVSSAMMISWIWGISIGAAVAGIYL 67

Query: 62  SWFYKTPIVTAWSTPAAVMLAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIP 121
           S  YKTP++TAWS P   +L       SL   +GA++ S  +    G      + L  IP
Sbjct: 68  SIRYKTPVITAWSAPGTALLVTLFPHISLNEAVGAYITSALVIFAIGATGYFDKLLKWIP 127

Query: 122 VPLGTAMLGAILLPFCAKAFTPLTDTPALFALLFTSYLLAKHLVPRYTMLVLLLVSLGSA 181
             +   M+  IL  F    F      P +   +   YL+AK L PRY M+ +L+  +G +
Sbjct: 128 QDVAAGMMAGILFQFGLGLFKATDSMPIIVFGMLGVYLVAKRLSPRYAMIWVLVSGIGLS 187

Query: 182 LALGSFQHADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYDA 241
           L LG     ++   +A P ++MPE+ W + LNL +PL L+++  Q LPG+A++K   YD 
Sbjct: 188 LILGKMNPVEMNFSLAIPQFIMPEWSWNSTLNLTIPLILVSLSGQFLPGMAIMKLSGYDT 247

Query: 242 PIKPILVGTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLA 301
           P KPI+  T +A+L  A  GG ++ LA+I+AA+CM +D  + K +RY A +  G FY+L 
Sbjct: 248 PAKPIISVTSIASLAVACVGGITIVLASITAALCMGKDAHELKDKRYIAGIANGIFYILG 307

Query: 302 GIFAALVVNLFLALPKPISAMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGAT 361
           G+FA  +V LF  LPK + A LAGLALLG +   +  A K D  R+ AL+TF+ T SG  
Sbjct: 308 GLFAGSIVMLFSLLPKELVAALAGLALLGAIATNISMAMKNDAQRDAALITFLATASGMH 367

Query: 362 LFGMSATLIGLVIG-LAYLRLT 382
             G+S+   G+ IG +A+L L+
Sbjct: 368 FLGLSSVFWGICIGVIAHLVLS 389