Pairwise Alignments

Query, 181 a.a., XRE family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 48.5 bits (114), Expect = 8e-11
 Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 19/191 (9%)

Query: 4   VMFKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEA 63
           V  +  +  Q++++R+   L++   A   G+S  ML +IE G+ SP++ATL  I+  L  
Sbjct: 39  VTLEEALGVQVRSIRRELDLTVSDLAGAAGISVGMLSKIENGQISPSLATLQSISKALNV 98

Query: 64  S----FSAF-------FANDPQLLSSER---SFPDDLNMKIHTLFPYAADTGLEIFEITL 109
                FSAF       F    Q +  ER          +  H L     D  +E + ITL
Sbjct: 99  PLTTLFSAFEERRDCSFVKAQQGVIIERRGTKVGHQYELLGHGL---GGDIVVEPYLITL 155

Query: 110 LDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHG-YAAVTEK 168
            +     +     GV E+I++L G +     ++ + L+ G+ + F S   HG    +   
Sbjct: 156 TEEAAPYTGFRHAGV-EFIYMLSGEVLYRHADRTYHLRPGDALMFDSGAAHGPEDLIKAP 214

Query: 169 AVFQNIVAYPR 179
             + +I+ Y R
Sbjct: 215 MTYLSIIVYGR 225