Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  191 bits (484), Expect = 1e-52
 Identities = 135/496 (27%), Positives = 235/496 (47%), Gaps = 15/496 (3%)

Query: 196 DGGMESNIGLLWKLYYTQRLLDGQDDATQIKAIEQAIGFQKQANSEMFSTGRFTISAGEE 255
           DG  +  +G    + + Q +L   D      A E A+     +N  + +  +     GE+
Sbjct: 225 DGAFQGIVGADLSVNFIQDMLTSADQKLYNGAGEMAL---ISSNGRLVAYTKDASKLGEK 281

Query: 256 WKNASYEEVFSQLNSQHEQAMMAVIESYRNYRQIYQEYTVTSL----ALLDFIAELEELA 311
             +       + LN      +   I+    + +++  +T+        L+  +     +A
Sbjct: 282 ASDLLDSNELTNLNQLKAGEVRYDIDKEHGHIELFLPFTIGQADARWTLMLQLPLSAVMA 341

Query: 312 DSKVEQQAVLILDGQAWAISSFKVLIIIALLVL---LLLGWILVNQILSPIQRLQERVTD 368
           DS+  Q      D +A   +    + I  LL+    LL+ W++ + I  P++++   + D
Sbjct: 342 DSQKLQS-----DLEAQRKTDIFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLND 396

Query: 369 ISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFK 428
           I++G GDLT R+     DE G +   F+ F+ K+Q +I  +  S      ++   +    
Sbjct: 397 IAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAI 456

Query: 429 VTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQ 488
            T + V+KQ  E++ ++ A   MTA +  V   A + +Q+  + D+ A   +  VR  + 
Sbjct: 457 RTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTST 516

Query: 489 SVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRG 548
           S+  L  E+ +    + +L     +I  +L  I GIAEQTNLLALNAAIEAARAGEQGRG
Sbjct: 517 SIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRG 576

Query: 549 FAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEES 608
           FAVVADEVR+LA +TQ +T  IQ  I QL+    + VRV+ +S  +  ++ +  ++A E+
Sbjct: 577 FAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEA 636

Query: 609 LHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISAL 668
           L  +   +S +  MN Q + A   Q      I  ++ ++  +         +S    + L
Sbjct: 637 LETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADL 696

Query: 669 KLKQEDLALKMSKFKI 684
               E     +++FK+
Sbjct: 697 TKLAEQQRRLINQFKV 712