Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  191 bits (484), Expect = 1e-52
 Identities = 119/365 (32%), Positives = 197/365 (53%), Gaps = 3/365 (0%)

Query: 322 ILDGQAWAISSFKVLII--IALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLR 379
           +LD +A A  + K L++   A L+ LLL W+    +  PI  +   + DI+ G+GDLT R
Sbjct: 349 VLD-KAQAAGTLKALLVGAAAALLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQR 407

Query: 380 VNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTF 439
           +    +DE GEL   F++F++K+Q  IA I QS   A+  A   SA  + T+E +  Q  
Sbjct: 408 LAYAKKDELGELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFR 467

Query: 440 EVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQ 499
           E++ ++ A+  M+A +  V + A   + +    D++A+  +S + Q+ + +  L  EV++
Sbjct: 468 EIDQVATASNEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSK 527

Query: 500 GTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 559
               + +L  +   I  VL  I  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+L
Sbjct: 528 AVGEVEALAVNSEQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNL 587

Query: 560 ATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRL 619
           A RTQ S   I+  I +++S     V  +++S  +         QA ++L +++  ++ +
Sbjct: 588 AKRTQDSVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVI 647

Query: 620 TQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKM 679
           + MN Q + A   Q      +  ++S ++ + ++   +  +S    S L          M
Sbjct: 648 SDMNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLM 707

Query: 680 SKFKI 684
            +F++
Sbjct: 708 DQFRV 712