Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  190 bits (483), Expect = 2e-52
 Identities = 114/356 (32%), Positives = 192/356 (53%), Gaps = 2/356 (0%)

Query: 330 ISSFKVLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFG 389
           + +  +L I  +L+L+LL    + Q++  ++ L+  +  +S G+ DLT R+ I  +DE G
Sbjct: 309 LGTLALLQIPMVLLLVLLAVYAIRQLVQRMKSLKTNIDALSTGDADLTRRITIRAEDELG 368

Query: 390 ELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATT 449
            +G S ++FI  +QN+I ++TQ+T    ++   L  T   T + + +   E +    A T
Sbjct: 369 AIGHSVNRFIVYLQNMIGEVTQATGAMSSSLEQLQRTSAHTNQILVRHASETDQTVTAIT 428

Query: 450 AMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKN 509
            M++ +  V   A E +      +++A  +   V +A+ SV+ L+ EV+  T ++ +++ 
Sbjct: 429 EMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASNSVSALIGEVSSATHSVENMRQ 488

Query: 510 HVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNT 569
               I   L  I  IA QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ ST+ 
Sbjct: 489 DAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQ 548

Query: 570 IQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEA 629
           I + +T+L +    SV  + N+        + T++    L ++A  +S +  ++ Q + A
Sbjct: 549 INEMLTRLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVSHINNLSTQIATA 608

Query: 630 ITHQEQSVTSIASSLSHLQALCQSAQEKIQQSE-HTISALKLKQEDLALKMSKFKI 684
              Q      I  S+  ++ + +   +    +E +T S L      +AL M +FK+
Sbjct: 609 AEQQSAVTEEINRSMVQIRQMVEELVQSGHATETNTQSLLDANGRVIAL-MGRFKV 663