Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  202 bits (514), Expect = 3e-56
 Identities = 128/384 (33%), Positives = 209/384 (54%), Gaps = 7/384 (1%)

Query: 301 LDFIAELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPIQ 360
           LD I     + ++KV+++    ++G    + S   + ++ LLV+  +G +L N IL P+ 
Sbjct: 183 LDGIEAQVAVVEAKVQKR----MEG---VLLSILGVAVVLLLVIAAVGMLLANTILRPLH 235

Query: 361 RLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAA 420
            ++  + DI+ G GDLT R+ IT+QDE G+L  +F++F++KI  L+  IT+ T+      
Sbjct: 236 LMKANLDDIAAGEGDLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLV 295

Query: 421 VDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQSTL 480
             +S   + + +A+ +Q  E + ++ A   M++ + +V   A+  S +    D   Q+  
Sbjct: 296 SQVSDQAQRSEQAMERQRHETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAK 355

Query: 481 SNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAA 540
             V  +   ++ LV ++     +++SL+  V+SI  VL+ I  IAEQTNLLALNAAIEAA
Sbjct: 356 RVVDGSIAQIHALVNDIRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAA 415

Query: 541 RAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTE 600
           RAGE GRGFAVVADEVR+LA+RTQ ST  IQ  I +L++  + +V  +  S   G  T+ 
Sbjct: 416 RAGEAGRGFAVVADEVRALASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSA 475

Query: 601 ITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQ 660
             ++A  SL  +A  I  +  MN Q + A   Q      I  S+  +     S  ++ Q 
Sbjct: 476 QANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQL 535

Query: 661 SEHTISALKLKQEDLALKMSKFKI 684
              T  +L    + L   + +F+I
Sbjct: 536 GAQTSRSLAELGQRLGQLVGQFRI 559