Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  194 bits (493), Expect = 1e-53
 Identities = 122/385 (31%), Positives = 204/385 (52%), Gaps = 13/385 (3%)

Query: 300 LLDFIAELEELADSKVEQQAVLILDGQAWAISSFKVLIIIALLVLLLLGWILVNQILSPI 359
           L+ F+ +   LAD  V           A AI++  VLI I++ V++ +    +NQI  P+
Sbjct: 271 LMVFVDKATALADVDV---------AVANAITTGIVLIGISVGVIIFI----INQIYKPL 317

Query: 360 QRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTA 419
            RL+  V D+++G+GDLT R+ +   D+  ++ + F++F   +QN++  I+ +T +  ++
Sbjct: 318 LRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSS 377

Query: 420 AVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGAREISQSVLNIDKNAQST 479
              LS T K   + +   + E + +  A T M+  +  V     + +Q      K AQ +
Sbjct: 378 IEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQS 437

Query: 480 LSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEA 539
           L  V  A  +V  LV +V   +E+I+++      I  VL+ I  I+EQTNLLALNAAIEA
Sbjct: 438 LVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEA 497

Query: 540 ARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADESVRVINNSMLKGTQTT 599
           ARAGEQGRGFAVVADEVR+LA RTQ ST  I   +T+L    D  V  +  +  +   T 
Sbjct: 498 ARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTA 557

Query: 600 EITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQ 659
           + TS+   SL+ ++  +S +  ++ Q + A   Q      ++ ++  ++ + +S     +
Sbjct: 558 DKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGR 617

Query: 660 QSEHTISALKLKQEDLALKMSKFKI 684
           Q+     +L     +L   + KFK+
Sbjct: 618 QTVGATESLSHSNHELEQLVGKFKL 642