Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  183 bits (465), Expect = 2e-50
 Identities = 131/480 (27%), Positives = 228/480 (47%), Gaps = 8/480 (1%)

Query: 208 KLYYTQRLLDGQDDATQIKAIEQAIGFQKQANSEMFSTGRFTISAGEEWKNASYEEVFSQ 267
           K++   +L++G   +   K+++  +        E       T + GE   +   E+V S 
Sbjct: 170 KMFANYQLVNGNTMSGMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSS 229

Query: 268 LNSQHEQAMMAVIESYRNYRQIYQEYTVTSLALLDFIAELEE--LADSKVEQQAVLILDG 325
           L   +     A++     +  I  +Y    + +     E  +  L  +    +    LD 
Sbjct: 230 LQQIYGSGASALLNK-SGFNLISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELD- 287

Query: 326 QAWAISSFKVLIIIALL-VLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITT 384
              A++   +L  +A+  + + +G  L N I  PI ++ +R TD+  G+GDL+ R+ +  
Sbjct: 288 ---AVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKG 344

Query: 385 QDEFGELGKSFDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTI 444
            DE  +L K F+ FIEKI   I D+ Q++   + AA  +S    VT +   +Q  +   +
Sbjct: 345 NDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQV 404

Query: 445 SNATTAMTAISSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETI 504
             A   M A  S++ S A   +++      NA    + V +A ++++ L  ++    + +
Sbjct: 405 VTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVV 464

Query: 505 NSLKNHVTSIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQ 564
             L +    I  +L  I GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LA+RT 
Sbjct: 465 EQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTA 524

Query: 565 GSTNTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQ 624
            ST  IQ+ I QL++ A  +V  ++       Q    + +A + L  ++  I  ++  N 
Sbjct: 525 SSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNT 584

Query: 625 QTSEAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
           Q + A   Q   V +I  ++  + A+ +      ++      +L+     L   +  FK+
Sbjct: 585 QVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644