Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  204 bits (518), Expect = 1e-56
 Identities = 117/349 (33%), Positives = 188/349 (53%)

Query: 336 LIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSF 395
           L ++ L+  ++   +LV++ ++P+Q +   +  ++ G GDLT R+ + +QDE G++ K+F
Sbjct: 216 LSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAF 275

Query: 396 DKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAIS 455
           + F++K+  L+ DI  S N  + AA +L       +  ++    E + +  A T M+A +
Sbjct: 276 NAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATA 335

Query: 456 SQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIE 515
            +V S     +Q++ + +         V  A   + ELV EV Q +  +  L      I 
Sbjct: 336 REVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKIT 395

Query: 516 PVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSIT 575
            VL  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA+RTQ ST  I + + 
Sbjct: 396 QVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLN 455

Query: 576 QLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQEQ 635
            L     ++V+ +N S  +G +T   + Q +ESL  ++  +S +  M  QT+ A   Q  
Sbjct: 456 ALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSA 515

Query: 636 SVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
               I  +L  +Q +     E  +Q+E   ++L    + +   +  FK+
Sbjct: 516 VAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564