Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  190 bits (482), Expect = 2e-52
 Identities = 174/710 (24%), Positives = 314/710 (44%), Gaps = 81/710 (11%)

Query: 16  VKTKILVTFSVVGILVTALGIWTIKTMYSSSSGLSYIVGPAWDTADGAMETTIQIEAQML 75
           V T+++  F  +  L+  + + ++  + S  S    +   A  T  G+      ++A  L
Sbjct: 5   VATRVIGGFVAISALLIVISVVSLYNLNSIGSATEEVNDVALPTVAGSNA----LKASFL 60

Query: 76  AVNRLILGEDSQRVEQILNTAITDVDTSSSRMIEAGLLSAAQTQQFSQFNSQYQQSRNTL 135
            + RL        +E+ LN  + D   S +   +       +  Q      + + + NT+
Sbjct: 61  NMGRLTF---ESYIEEDLN-GLKDKRASFNSAKDTFESEYKKLAQAVNNEPELKSTLNTV 116

Query: 136 ITSYKNYIETKKSYDKATQVLVDFGEKLET-LGD---------------SAVEELEREPN 179
             SY+ YI   ++  K  Q+ +D    ++  LGD               S ++ ++R+PN
Sbjct: 117 RESYEAYITNVEAMYKNHQMYLDIRNTIQDRLGDAEDNADDASTYLLDFSDLDAVQRDPN 176

Query: 180 RNITWQSDVMERWQAADGGMESNIGLL------WKLYYTQRLLDGQDDATQIKAIEQAIG 233
                        +AA+ G +    LL      ++   T+ L+  Q    ++  + + + 
Sbjct: 177 LR-----------RAAEIGSQLETSLLSLLTVSYEYIKTETLVRSQTLGNEVDLVVEKVV 225

Query: 234 FQKQANSEMFSTGRFTISAGEEWKNASYEEVFSQLNSQ------HEQAMMAVIESYRNYR 287
            Q    S+M  T      AG    + + +++   +N+       ++  +   ++      
Sbjct: 226 TQL---SDMMQT------AGGRDDSGTLDDINDLVNNAINAIKANDGVVQLHVDRLERRN 276

Query: 288 QIYQEYTVTSLALLDFIAELEEL---ADSKVEQQAVLILDGQAWAISSFKVLIIIALLVL 344
              +    +   +   +  LE L   AD K       +    A   +   V++II++ V 
Sbjct: 277 DAEKALNASDSNIAQAVVALENLLNLADKKASHVESQVNGAIATGNTFVIVVVIISIAVA 336

Query: 345 LLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKSFDKFIEKIQN 404
             +G++ V  I  P+ R+ E +T  S  +GDLT R++ + QDEFG L ++ +  I  ++ 
Sbjct: 337 AFIGYVTVRAITRPLYRVNELLTVAS--SGDLTHRLDDSAQDEFGLLARNCNTLIGNLKE 394

Query: 405 LIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAISSQVISGARE 464
           LI  I         A+   SA    T  ++  Q  ++  ++ ATT M + S  V+  A +
Sbjct: 395 LITAINVRAEQLAAASEQTSAVTAQTTHSIQDQKSQIGQVATATTEMHSTSQLVVQNAED 454

Query: 465 ISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVTSIEPVLADINGI 524
               + + D  A++      +   ++  L  +V +  + IN L     SI  +L  I G+
Sbjct: 455 TLSQIRHADAEAENVRQISLENKNTIEILSRDVQEAADVINKLHQDSASIGGILDVIRGV 514

Query: 525 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGSTNTIQQSITQLRSSADES 584
           A+QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST  I   I  L++ A+++
Sbjct: 515 ADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTQEINAMIEVLQAGAEKA 574

Query: 585 VRVINN----------SMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTSEAITHQE 634
           V V+N              K TQ  +I S A    H V+ +I +  +     S+ I+ + 
Sbjct: 575 VSVMNQGKEQTAACVAQTEKATQALDIISDAVHKAHDVSSQIEQSAREQNTVSQEISEKL 634

Query: 635 QSVTSIASSLSHLQALCQSAQEKIQQSEHTISALKLKQEDLALKMSKFKI 684
           +++  IA   +       +  ++  +S H ++ L    E+L   + +FK+
Sbjct: 635 ETIVGIAEETT-------AGAQQTSESSHEVARL---AEELQQSIRQFKV 674