Pairwise Alignments

Query, 684 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  178 bits (451), Expect = 7e-49
 Identities = 117/342 (34%), Positives = 190/342 (55%), Gaps = 14/342 (4%)

Query: 335 VLIIIALLVLLLLGWILVNQILSPIQRLQERVTDISEGNGDLTLRVNITTQDEFGELGKS 394
           V  +++++++++L +++   I+ P+Q + ER+ DIS+G GDLT  +  T QDE   L + 
Sbjct: 191 VFCLVSIVLVVVLVYVIGGSIVKPVQEVSERMKDISQGEGDLTRSLPETGQDEVTRLARY 250

Query: 395 FDKFIEKIQNLIADITQSTNLAKTAAVDLSATFKVTAEAVNKQTFEVNTISNATTAMTAI 454
           F+++ EK+++ +  I ++ N + T   +L  T    + A   QT   N +  A  AM  +
Sbjct: 251 FNEYTEKMRHSLLGIRENIN-SLTQQAELVETSSKNSNA-QAQTQNENMLQVAA-AMEEM 307

Query: 455 SSQVISGAREISQSVLNIDKNAQSTLSNVRQAAQSVNELVAEVTQGTETINSLKNHVT-- 512
           ++Q+     E+S +  + +K+  S   NV+  A  V+  V ++   T  I S+ + VT  
Sbjct: 308 TTQI----NEVSNNADSAEKSTSSARGNVQNGASVVDSTVNDIRSLTSDIESVSSAVTEL 363

Query: 513 -----SIEPVLADINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTQGST 567
                SI  VL  I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RT  ST
Sbjct: 364 AAQTESIGAVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTGQST 423

Query: 568 NTIQQSITQLRSSADESVRVINNSMLKGTQTTEITSQAEESLHQVAIEISRLTQMNQQTS 627
           + IQ  I +L+S+A  +V  +  S    T+T +   QA ++L +    ++ +  M+ + +
Sbjct: 424 DEIQAMIEKLQSNAKSAVDAVKVSQSASTKTVDNAIQANQNLQEADRLMTEIADMSSEIA 483

Query: 628 EAITHQEQSVTSIASSLSHLQALCQSAQEKIQQSEHTISALK 669
            A   Q ++ T     ++ L     S+     +      AL+
Sbjct: 484 RATEQQAEAATEANMRINALSGAADSSLRTADELAAASQALR 525