Pairwise Alignments

Query, 626 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., Probable transmembrane protein from Variovorax sp. SCN45

 Score = 78.2 bits (191), Expect = 6e-19
 Identities = 101/388 (26%), Positives = 156/388 (40%), Gaps = 42/388 (10%)

Query: 10  ALLTERRFLPYFITQFLGAFNDNIFKNVLL-LFVAFAGPQALPISSNLFINLAAGLFILP 68
           A  + R        QFL +  DN    V + L +    P  +  +  LF       F L 
Sbjct: 4   AARSRRALASVVAAQFLSSLADNALLIVAIDLLMQRHAPGWMTPALRLF-------FYLS 56

Query: 69  FFLFSATAGVLADKLEKSRYIRWVKLLEIAIMLCGAIGFITQSYGISLFLLFLMGTQSAF 128
           + L +A AG  AD   K R +    L+++    CG + +  Q     L    L+G  +A 
Sbjct: 57  YVLLAAFAGAAADAAPKGRVLMATNLVKLCG--CGLLLWHVQP----LLAYTLVGLGAAA 110

Query: 129 FGPVKYALLPQQLKSEELVPGNALVETGTFLAILLG-TLGAGLIASADNAHYFAAAAVVI 187
           + P KY +LP+ L  + LV  N  VE  T L+IL G  LG+ L+ S       A  A+  
Sbjct: 111 YSPAKYGILPELLPQDALVGANGWVEATTVLSILFGVALGSTLVGSKQ-----ALMAIGA 165

Query: 188 FAVLGYLSSRAIPLAPA-SAPHLEFRWQPITQTKQTLRIAKRDRAIFQSIMAISWFWFLG 246
             +L    + AIP +PA +   L      +     +L +  RD     S+   S FW   
Sbjct: 166 VYLLAAACTLAIPHSPARNRAALAHPGVLLRDFSHSLALLWRDPDARISLAVTSLFWAAS 225

Query: 247 AGYLTQFPNFTKLHLNGNEAAVSFLLALFSVGIAVGSLACDKLSGHRIEVGIVPLGSVGI 306
           A        F    L    +  + L    ++G+A+G+L   +       +  +PLG V  
Sbjct: 226 ATLQFLVLRFAAERLGLTLSQGALLQIAVALGMAMGALGASRWFPLPRALRALPLGIV-- 283

Query: 307 SFFGYLMATSIPADLPIFSTFADFVTYSALWPLFAYLLLIGVFGGVFIVPLYAMLQQRAK 366
                     + A + + +     V  + L      L++IG F G+ +VP+ A+LQ R  
Sbjct: 284 ----------LGAVVLLMTLVTHLVVAAVL------LVVIGAFAGLLLVPMNALLQSRGL 327

Query: 367 V-TERAQVIAALNIYNSLFMVGSAALGI 393
           +     Q IA  N   SL     A LG+
Sbjct: 328 LRMNPGQSIAVQNFNESL--ASLAMLGV 353