Pairwise Alignments

Query, 291 a.a., preprotein translocase subunit Tim44 from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Uncharacterized membrane protein Bcep18194_A6058 from Variovorax sp. SCN45

 Score =  101 bits (251), Expect = 3e-26
 Identities = 94/340 (27%), Positives = 156/340 (45%), Gaps = 59/340 (17%)

Query: 4   LFSLIALIMVSVAVTPIAEAKKFGGGKSFGNNSYKT---------AP-APKQQQQKNDTV 53
           LF  +AL++ SV     AEA + GGGKS G  S            AP AP QQ   N   
Sbjct: 7   LFLAVALVLGSVQ----AEAARMGGGKSVGRQSSNVTQRQATPPAAPGAPAQQGATNAAA 62

Query: 54  -KNDAANPASSAKKGLMGGLLGGLLAGGLLAAFFGGAFEGIQFMDILIMGLIAF---VIF 109
            K  AA PA++A K   G +LGGL AG  LA        G  F +IL++GL+     V++
Sbjct: 63  AKPGAAAPAAAAPKRPWGAMLGGLAAGLGLAWLAHSLGLGAGFGNILLIGLLVLAGVVVW 122

Query: 110 KLMRAFLASKQGSINQ------------------SQQQPAYSGMNRT--PFEQPNVHNFE 149
           ++++A      G+  Q                  +Q  PA  G + +  P+E+ N   F+
Sbjct: 123 RMIKARSQQASGASRQGGFAFQGAGASPSNASAPAQYSPANVGNDASARPWER-NATAFD 181

Query: 150 QPQSMGGG--------------FGSAAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWN 195
              + G G               GSA         PAGFD   F+  A+ ++  LQ AW+
Sbjct: 182 ATPAAGHGSSLSAAGAAAGGSMIGSALGGSQSWGIPAGFDVEGFLGAAKRNFVTLQDAWD 241

Query: 196 HNQLETIREYVSPSLFEDLK---AERANYEG--DQHTDVMYVDAEIVRADYDANRAQLSL 250
              +  +R  ++ S+ ++++   A+RA++ G     T+V+ +DA+++  +   +    S+
Sbjct: 242 RADVSMLRSMMTDSMVDEIRSQLADRASHTGGASNKTEVVMLDAKLLGIEELPDAYMASV 301

Query: 251 QFSGRYRDAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQ 290
           +FSG  R+          +VW++ + ++   + WL+ G+Q
Sbjct: 302 EFSGMIREDASAGPGPFREVWNMTKPIS-GTSGWLVAGVQ 340