Pairwise Alignments

Query, 291 a.a., preprotein translocase subunit Tim44 from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 5e-41
 Identities = 102/293 (34%), Positives = 152/293 (51%), Gaps = 15/293 (5%)

Query: 1   MKRLFSLIALIMVSVAVTPIAEAKKFGGGKSFGNNS-YKTAPAPKQQQQKNDTVKNDAAN 59
           M+R  S+   + V + ++  A AK+FGGGKS G+   ++T  A         TV   A  
Sbjct: 1   MQRFLSIALALCVGLTLSLDASAKRFGGGKSSGSAPIHQTRQATPTTPAAAPTVPGRAPA 60

Query: 60  PASSAKKGLMGGLLGGLLAGGLLAAFF-GGAFEGIQFMDILIMGLIAFVIFKLMRAFLAS 118
            AS A + L  G L GL AGGLLA+ F G  FEG Q MD LI+ LIAF++F+    F+A+
Sbjct: 61  AASGASRWL--GPLAGLAAGGLLASMFMGDGFEGFQIMDFLIVALIAFLVFR----FIAA 114

Query: 119 KQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVA 178
           ++         P ++ M R    QP      QP   GG    AA +    N PA F+  +
Sbjct: 115 RRRQQQPQMAMPGHAPMQREAHAQP-----AQPSIFGGSAAPAATAAPVINAPAWFNEQS 169

Query: 179 FVNGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANY-EGDQHTDVMYVDAEIV 237
           F+  AR H++ LQ  W+ N+++ I E+V+P + E LK ERA   +G Q T +  ++ ++ 
Sbjct: 170 FLAAARNHFQSLQQHWDANEMDKISEFVTPQMLEFLKRERAELGDGFQSTYIDNLEVQLD 229

Query: 238 RADYDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQ 290
             D  A+R   +L F G  +++     E   + WH+ R     N PWL+ GI+
Sbjct: 230 GVDDRADRTDATLTFRGVSKNSRFDQGEVFSESWHMVR-AQGENQPWLVAGIR 281