Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., lytic transglycosylase from Pseudomonas simiae WCS417

 Score =  145 bits (366), Expect = 1e-39
 Identities = 101/302 (33%), Positives = 153/302 (50%), Gaps = 15/302 (4%)

Query: 26  QYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKNQPEKKLTLDEYIPRAVPEWKV 85
           Q  E + +  R+ G +   L   FR+ + K   + A     E+     EY P  + + +V
Sbjct: 37  QVAEFVGEMTRDYGFAGEQLMGVFREAQKKQAILDAISRPAERVKQWKEYRPMFLTDARV 96

Query: 86  KQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAYE-GR 144
            +    + +H   L R  ++YGV  + IV++ G+E+ +G  TG++RVIDALSTL ++   
Sbjct: 97  ARGVDFWRQHEAVLARAEQEYGVPAQVIVSIIGIETFYGRNTGSYRVIDALSTLGFDYPP 156

Query: 145 REEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDIW 204
           R +FFRKE    L +  +  + P  +KGS+AGAMG  QFMPSSF  +A D +GDG  +IW
Sbjct: 157 RADFFRKELREFLLLAREEQVDPLTLKGSYAGAMGLPQFMPSSFRAYAVDFDGDGHINIW 216

Query: 205 GTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGF--DHALEG--RQPEKGKTLQEWSKL 260
               D   S A+Y  + GW      G  V I      D A EG  +  E  KT+ E   L
Sbjct: 217 SNPDDAIGSVASYFKRHGW----VAGEPVVIRADVTGDRADEGLTQGIEPAKTVGELRAL 272

Query: 261 GVTRYDGKPLPALSDDIKAWLIMPDDEAGRIY-LVYNNYNVLMKWNRSHYFALAVSHLAD 319
           G +  +     AL DD+       + E G  Y +   N+  + ++NRS  +A+AV  L+D
Sbjct: 273 GWSSQN-----ALPDDMPVTAFRLEGENGPEYWMGLKNFYAITRYNRSVMYAMAVHQLSD 327

Query: 320 RI 321
            +
Sbjct: 328 ML 329