Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Membrane-bound lytic murein transglycosylase B from Sphingobium sp. HT1-2

 Score =  192 bits (487), Expect = 1e-53
 Identities = 114/334 (34%), Positives = 180/334 (53%), Gaps = 22/334 (6%)

Query: 6   SIVLGLALSAPVLA-NEVSFEQYVERLKQQAREEGISERILNEAFRDVEYKPRSVVADKN 64
           ++V GLA     +A ++  F  Y+E L+ +AR  GI +  L+  F  +   PR V  D++
Sbjct: 19  TVVAGLAAPQVAVAQDDGDFRAYLESLRPKARAMGIRDATLDAVFPTLTINPRVVALDQS 78

Query: 65  QPEKKL-----TLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGV 119
           QP           + Y  + V   ++ + +++Y  +   L RI  + GV    +VA++G 
Sbjct: 79  QPGGGAYSPIPNFEPYRVKHVDAARISRGRAVYAANRARLARIEAETGVPEEIMVAIFGH 138

Query: 120 ESNFGAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMG 179
           E+N+G++TG+F +I +L+TLA+EGRR   F  E +A L++L  G +    + GSWAGA G
Sbjct: 139 ETNYGSYTGDFDLIRSLATLAHEGRRRTLFEPELLATLKMLNDG-VPRSRLVGSWAGATG 197

Query: 180 QCQFMPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGF 239
             QF+PS +L  A DG+GDG+ DIW +++D  AS ANY   +GW     WG  V +P  F
Sbjct: 198 YPQFLPSVYLKLAKDGDGDGRADIWTSQADALASIANYFVAAGWRRGQPWGVAVSVPSSF 257

Query: 240 DHALEG------------RQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDE 287
           + A                +  +  T+ EW KLG+    G   PA  D + A L+ PD  
Sbjct: 258 NRASVAARTTAPRCPRVFNRHSRWLTMAEWRKLGLFPASG-IWPA--DTVMATLLEPDGP 314

Query: 288 AGRIYLVYNNYNVLMKWNRSHYFALAVSHLADRI 321
               YL+ +NY  ++ +N S+++AL+V  LAD +
Sbjct: 315 GKTAYLLTSNYRAILDYNCSNFYALSVGLLADAV 348