Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., lytic murein transglycosylase B from Pectobacterium carotovorum WPP14

 Score =  108 bits (270), Expect = 2e-28
 Identities = 78/244 (31%), Positives = 121/244 (49%), Gaps = 22/244 (9%)

Query: 85  VKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNFRVIDALSTLAYE-G 143
           V+   + + ++   LQR    YGV P  IV + GVE+ +G   G  R+IDAL+TLA++  
Sbjct: 124 VQNGVAFWNQYQDALQRAQNIYGVPPEIIVGIIGVETRWGRVMGKTRIIDALATLAFDYP 183

Query: 144 RREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDI 203
           RR ++F  E    L +  +    P +++GS+AGAMG  QFMPSSF N+A D +G+G  ++
Sbjct: 184 RRADYFAGELETFLLMARKEGNDPLSLRGSYAGAMGYGQFMPSSFKNYAVDFDGNGHTNL 243

Query: 204 WGTRSDVFASTANYLSQSGWDD-----KYTWGRQVKIPKGFDHALEGRQPEKGKTLQEWS 258
           W    D   S ANY    GW           G+   +P GF+            +L E  
Sbjct: 244 WDP-VDAIGSVANYFKAHGWVKGAPVAVQANGQAPLLPNGFNTRY---------SLTELQ 293

Query: 259 KLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLV-YNNYNVLMKWNRSHYFALAVSHL 317
             G+T     P  +L+   +A L+  D   G  Y     N+  + ++N S ++A+AV  L
Sbjct: 294 AAGLT-----PQHSLAGYNEASLLRLDIGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQL 348

Query: 318 ADRI 321
            + +
Sbjct: 349 GEAV 352