Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., membrane-bound lytic murein transglycosylase B (NCBI) from Escherichia coli BW25113

 Score =  103 bits (258), Expect = 5e-27
 Identities = 88/319 (27%), Positives = 148/319 (46%), Gaps = 32/319 (10%)

Query: 19  ANEVSFEQYVERL-------KQQAREEGISERILNEAFRDVEYK-PRSVVADKNQPEKKL 70
           AN  + +Q+++++       +QQ +E     + L+   R ++ + P + V   + P    
Sbjct: 55  ANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAW 114

Query: 71  TLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVESNFGAFTGNF 130
               Y  + +    V+     + ++   L R  + YGV P  IV + GVE+ +G   G  
Sbjct: 115 L--RYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKT 172

Query: 131 RVIDALSTLAYE-GRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQCQFMPSSFL 189
           R++DAL+TL++   RR E+F  E    L +       P  +KGS+AGAMG  QFMPSS+ 
Sbjct: 173 RILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYK 232

Query: 190 NFAADGNGDGKKDIWGTRSDVFASTANYLSQSGW--DDKYTW---GRQVKIPKGFDHALE 244
            +A D +GDG  ++W    D   S ANY    GW   D+      G+   +P GF     
Sbjct: 233 QYAVDFSGDGHINLWDP-VDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGF----- 286

Query: 245 GRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLV-YNNYNVLMK 303
               +   ++ + +  G+T     P   L +  +A L+  D   G  Y     N+  + +
Sbjct: 287 ----KTKYSISQLAAAGLT-----PQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITR 337

Query: 304 WNRSHYFALAVSHLADRIA 322
           +N S ++A+AV  L   +A
Sbjct: 338 YNHSTHYAMAVWQLGQAVA 356