Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  135 bits (340), Expect = 1e-36
 Identities = 71/233 (30%), Positives = 135/233 (57%), Gaps = 11/233 (4%)

Query: 1   MKKLLSIVLGLAL-----SAPVLANE-----VSFEQYVERLKQQAREEGISERILNEAFR 50
           M+ + +I+ G+A+     + PV+A +       F+ +V   KQ+A   G+S  +L+ AF 
Sbjct: 1   MRAMKAILAGVAMVSVLAATPVMAAQCGNTSAGFDAWVSAFKQEAAGRGVSASVLDRAFS 60

Query: 51  DVEYKPRSVVADKNQPEKKLTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQP 110
            V Y   ++ AD+ Q   KL+ ++++ +   +  + + +++ + +      I + YGV  
Sbjct: 61  GVSYNQATIRADRGQHSFKLSFEQFMQKRGGQTIISRGKTMKKNNAALFASIERTYGVPA 120

Query: 111 RFIVALWGVESNFGAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAM 170
             ++A+WG+E+ FG F GN   + A++TL+++ RR ++F ++  AAL+++  G +   A 
Sbjct: 121 GPLLAIWGMETGFGGFMGNQHTLSAVATLSFDCRRSDYFTEQLYAALKLVGSGSLNVNA- 179

Query: 171 KGSWAGAMGQCQFMPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGW 223
           KG+  G +GQ QF+P + + +  D + DG+ D+ G+R+D  ASTAN+L   GW
Sbjct: 180 KGAAHGEIGQTQFLPLNVVRYGVDFDRDGRIDLVGSRADALASTANFLVGHGW 232