Pairwise Alignments

Query, 323 a.a., lytic murein transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., lytic murein transglycosylase from Agrobacterium fabrum C58

 Score =  150 bits (379), Expect = 5e-41
 Identities = 85/321 (26%), Positives = 160/321 (49%), Gaps = 14/321 (4%)

Query: 10  GLALSAPVLANEVSFEQ---------YVERLKQQAREEGISERILNEAFRDVEYKPRSVV 60
           G AL+ P +A+    +Q         ++E +K +A  +G+    + +A    +  P+ + 
Sbjct: 21  GSALATPPVASPDDPKQVACGGDLGAFLEGVKAEAVAKGVPAAAIEKALAGAQIDPKVLS 80

Query: 61  ADKNQPEKKLTLDEYIPRAVPEWKVKQAQSLYEKHYTELQRIGKQYGVQPRFIVALWGVE 120
            D+ Q   + T  E+  R V + ++   +   ++  +   R   ++GV    I A W +E
Sbjct: 81  RDRAQGVFRQTFLEFSQRTVSQARLDIGRKKLQELSSTFARAENEFGVPAGVIAAFWAME 140

Query: 121 SNFGAFTGNFRVIDALSTLAYEGRREEFFRKETMAALQILEQGHIAPEAMKGSWAGAMGQ 180
           ++FGA  G+F   +AL TL+++ RR E FR + +A +++++ G + P    G+WAG +GQ
Sbjct: 141 TDFGAVQGDFNTRNALVTLSHDCRRPELFRPQLLALIEMVQHGDLDPATNTGAWAGEIGQ 200

Query: 181 CQFMPSSFLNFAADGNGDGKKDIWGTRSDVFASTANYLSQSGWDDKYTWGRQVKIPKGFD 240
            Q +P   + F  DG+G+G  ++  +  D   + A ++   G+     W ++V +P+   
Sbjct: 201 VQMLPKDIIAFGVDGDGNGHINVKDSAPDAILTAAKFIQHLGFKKGEPWMQEVSVPENLP 260

Query: 241 HALEGRQPEKGKTLQEWSKLGVTRYDGKPLPALSDDIKAWLIMPDDEAGRIYLVYNNYNV 300
               G       T  +W  LGVT  DG    A    + A LIMP    G  ++ Y N+N+
Sbjct: 261 WEKSGL--GGSLTAGDWFALGVTPRDGNKNFA---SLPAALIMPQGRKGPTFITYPNFNI 315

Query: 301 LMKWNRSHYFALAVSHLADRI 321
            ++WN+S  +  + ++ A+R+
Sbjct: 316 YLEWNQSFIYTTSAAYFANRL 336