Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  176 bits (447), Expect = 5e-49
 Identities = 105/292 (35%), Positives = 159/292 (54%), Gaps = 5/292 (1%)

Query: 9   MALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFY 68
           M LF  +++  SFTAAA  LG+S   VS++L  LE  LGV+L+ R+TR   +T  G  +Y
Sbjct: 7   MRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTPLGQSYY 66

Query: 69  AQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVH 128
                LL+ V   +  +  Q  E  G IRL    SF   H+   L    ++YP++ VEV 
Sbjct: 67  ESALRLLSEVEQVEQGIAGQNSEPRGTIRLSAPLSFAMAHLGCLLPLFLRRYPQVAVEVD 126

Query: 129 LFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALME 188
           L D  VD++ EG DL +          +A+RIA    V  ASPDYL   G+P +P  L E
Sbjct: 127 LSDRPVDLIGEGYDLVLRIGTLEDSTLIARRIASIPRVYCASPDYLALRGTPHKPDDLAE 186

Query: 189 HNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYLLR 248
           H+CL Y    +   +W F   G  Q + V+G   V+  + +RD A+AG G+ YL T+++ 
Sbjct: 187 HDCLPYGHGRQ--VQWRFK--GKVQALNVSGRMRVNNGDLLRDTAIAGLGVTYLPTFIVG 242

Query: 249 DEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPC 300
           D  + G+L+ +L E+ A + +   AVYP  +   +   A++EF+++RL + C
Sbjct: 243 DALKDGRLVTVLDEF-APEALTLSAVYPQHRQGSRPVQALVEFLRERLASGC 293