Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  159 bits (402), Expect = 8e-44
 Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 5/297 (1%)

Query: 9   MALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNLFY 68
           M +F  ++   S +AAA  L +S   V++ +A LE   G +L+ RTTR  +LT AG    
Sbjct: 1   MRVFVNVVDSGSLSAAADKLDLSRPVVTRYVAELEQWTGARLLHRTTRRLSLTAAGEELL 60

Query: 69  AQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVEVH 128
            +CR++L +  + Q+ +    +   G +R+  S SF    +  A+    + YP + V++ 
Sbjct: 61  PRCRQVLELTGDMQAAVRHPAEAPRGQLRITASTSFAQAQLAGAVADYVRLYPGVAVDLV 120

Query: 129 LFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMALME 188
           L D  V+++ E +DL I    ++    +A+R+ DCR VV ASP YL   G P     L +
Sbjct: 121 LLDRSVNLVDERIDLAIRVAAEIDPNLIARRLTDCRSVVCASPGYLKEQGRPLRVEELAQ 180

Query: 189 HNCLIYRSWERDYTRWSFSR--DGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATYL 246
            NCL +  + R  + W+F+R  DG   ++ V GN S + A ++   A AG GIA L TYL
Sbjct: 181 RNCLTHSYFGR--SLWNFTRKEDGEPVSVAVGGNVSTNDAASLMYLARAGAGIAMLPTYL 238

Query: 247 LRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCYWD 303
             +  + G+L++L  ++   Q +  YAVY SR+HMP     +++F+  R      WD
Sbjct: 239 TSELLQKGELVRLFTDFEP-QVVGMYAVYASRKHMPATLRTMLDFLAARFTEVPAWD 294