Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  167 bits (422), Expect = 4e-46
 Identities = 99/295 (33%), Positives = 154/295 (52%), Gaps = 2/295 (0%)

Query: 2   FAERASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLT 61
           F  R+ +M +FA + Q  S +AAA ALG++ S VS+ LA  E  LG +L+ RTTR+ TLT
Sbjct: 3   FGGRSGEMEIFAKVAQAGSLSAAARALGLTPSAVSRILARTEQRLGTRLLLRTTRALTLT 62

Query: 62  DAGNLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYP 121
             G  +    R +L  +   +  + DQ     G +R+  +     L V+P L     +YP
Sbjct: 63  PEGEAYLRGARRVLADMLEVEEAITDQ-GVPRGRLRVSAALGHARLTVVPLLAAFSARYP 121

Query: 122 ELNVEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPT 181
           ++ V++ L D   D+L    D+ +           A+ I +   VV ASP+YL RYG+P 
Sbjct: 122 QVLVDLTLSDEVADILGGQADVALRFGHLPDSSLSARAIGETGQVVVASPEYLQRYGTPL 181

Query: 182 EPMALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAY 241
           EP  L  HNCL + ++ R    W F RDGH  ++KV GN      EA+   A  G G+A 
Sbjct: 182 EPEDLARHNCLRF-NFRRAMPDWPFHRDGHTFSLKVKGNIECSSGEALAQLARLGAGVAR 240

Query: 242 LATYLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRL 296
           + T+ + D+   GQL+ LL  ++   + P +AV+     MP +    ++F+ ++L
Sbjct: 241 IGTFTVADDLANGQLVPLLEAYNPGDREPIHAVFVGGPAMPARVRVFVDFLVEQL 295