Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., HTH-type transcriptional regulator DmlR from Pseudomonas sp. DMC3

 Score =  163 bits (413), Expect = 4e-45
 Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 4/298 (1%)

Query: 7   SQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNL 66
           + +A F   +   SFTAAA  LG++ S V K +  LE+ L V+L+ RTTRS +LTD G +
Sbjct: 7   NDIAAFVASVDTGSFTAAARQLGLTRSAVGKSIVRLESRLQVRLLNRTTRSLSLTDDGRV 66

Query: 67  FYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVE 126
            Y +C  +L  +   +  +  +R    G +R+ L  + G LHV+  +E+  + +P L ++
Sbjct: 67  LYERCVGILQDLDEVEEALAFRRSTPSGRLRMSLPVALGRLHVVQHIERCLRDWPSLAID 126

Query: 127 VHLFDHKVDMLKEGLDLWITSNEQLPE-GYVAQRIADCRFVVAASPDYLLRYGSPTEPMA 185
               D  VD++ EG DL I       + G + + +A  + +  ASPDYL  + +P  P  
Sbjct: 127 ATFSDRLVDLIDEGFDLAIRIGPPKEDSGLLTRTVAYQQMITCASPDYLNEHPAPQTPED 186

Query: 186 LMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATY 245
           L  H CL + S  R    W+F  +G    +  AG   +D AEA+  A  AG GIA L +Y
Sbjct: 187 LAGHACLHFVSGGR-LLAWNFRVNGQPVPVIHAGRLQMDSAEALHQATAAGLGIATLPSY 245

Query: 246 LLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLGTPCYWD 303
           ++  + R+G+L+QLL  + A    P   +YPS++H+  K    I+ + +   +P  WD
Sbjct: 246 VVNGDLRSGKLVQLLAGY-AEAAEPIRVIYPSKRHLSPKIRLFIDRLVE-AWSPAPWD 301