Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  162 bits (409), Expect = 1e-44
 Identities = 103/293 (35%), Positives = 152/293 (51%), Gaps = 7/293 (2%)

Query: 7   SQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGNL 66
           +++  FA +++H  F  AA  LG+S S +S+    LE  LGV+L+ RTTRS  LT AG L
Sbjct: 7   AELRAFAAIVEHGGFARAAAQLGMSASALSQTQRNLETRLGVRLLNRTTRSVALTQAGEL 66

Query: 67  FYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNVE 126
             A+    L  +  A ++    R +  G +RL  S      ++ P L      YP++ V+
Sbjct: 67  LLARLSPALAEIEAAVTQTAALRLQPAGTLRLNASGLAAIYYLAPLLAPFNAHYPDIVVD 126

Query: 127 VHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRI-ADCRFVVAASPDYLLRYGSPTEPMA 185
           + + D  VD++  G D  +  +E+L +  VA  +  + R  V ASP YL RYG P  P A
Sbjct: 127 LSVDDRLVDIVAAGFDAGVRLHERLEKDMVAVALGGEQRMCVVASPTYLARYGVPQTPDA 186

Query: 186 LMEHNCLIYRSWERDYT--RWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLA 243
           L +H CL  R W  + +  RW F R G    I V G   VD  + +  AA+ G GIAYL 
Sbjct: 187 LRQHRCLNTR-WPTNGSLYRWEFERGGEKLEIAVEGPLIVDEPQVLVRAAMDGLGIAYLF 245

Query: 244 TYLLRDEFRTGQLIQLLPEWSANQQMP-FYAVYPSRQHMPKKTSAVIEFIKQR 295
              + +  R G+L+ LL  W+     P FY  YP+ + MP+   A I+F +Q+
Sbjct: 246 ESQVAEALRDGRLLSLLTAWT--PPFPGFYLYYPANRQMPRPLRAFIDFARQQ 296