Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  164 bits (415), Expect = 3e-45
 Identities = 89/298 (29%), Positives = 159/298 (53%), Gaps = 6/298 (2%)

Query: 6   ASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAGN 65
           A  + +   ++   SF+AAA  LG + + V+K++  LE +L   L+ R+ R   LT++G 
Sbjct: 8   AKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGVALTESGQ 67

Query: 66  LFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELNV 125
             Y    E+LT       ++   +    G+IR+G S  FG  H+ PA+ +L + YPEL V
Sbjct: 68  RCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQV 127

Query: 126 EVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPMA 185
              LFD ++D++++ +DL I  N+++P+ Y+A  +   + ++ A+P+YL +Y  P     
Sbjct: 128 HFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSLQE 187

Query: 186 LMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLATY 245
           L  H+CL+ +  +  +  W        +++KV+G+ S +  E V   A+ G GI   + +
Sbjct: 188 LSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIMLRSEW 247

Query: 246 LLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFI----KQRLGTP 299
            +     +G+L+Q+LPE++  Q    +AVY    +   K    +EF+    +QRLG P
Sbjct: 248 DVLPFLESGKLVQVLPEYA--QSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRLGKP 303