Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  160 bits (404), Expect = 5e-44
 Identities = 98/291 (33%), Positives = 151/291 (51%), Gaps = 1/291 (0%)

Query: 5   RASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAG 64
           RA  + LFA + +  SF+  A A  ++ S VSK++A LE  LG +L+ RTTR  TLT+AG
Sbjct: 2   RADDLILFAQIAEMGSFSKVAEANNITNSVVSKRIAKLEKELGTQLLYRTTRKLTLTEAG 61

Query: 65  NLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELN 124
                    +      A   +    +++ G I++ +    G L +  A+ +    +P L+
Sbjct: 62  QALKQGAMNVKASTQEAIDTISGYSEQISGHIKMSVPTISGDLLLADAVAEFCTLHPGLS 121

Query: 125 VEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPM 184
           V++ L +  V++++EG DL I +        +A+   D  +VV  SPDY+ R G P  P 
Sbjct: 122 VDMSLDNRFVNLVEEGFDLVIRTGYLEDSSLIARHFLDSHWVVCTSPDYIRRKGRPKAPE 181

Query: 185 ALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLAT 244
            L  HNCL+Y         W F+    + TI V G +S D A A+R AA+AG GIAY+  
Sbjct: 182 DLSFHNCLLYSYHTSGAREWEFTSSQGSYTITVDGAFSSDNAGALRKAALAGRGIAYVPK 241

Query: 245 YLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQR 295
            L+ ++   G L+ L PE    + +  YAVYP  +   +K   +IE I+QR
Sbjct: 242 CLVFEDLCNGTLVDLFPE-RVGKVLGVYAVYPYSRQPSRKIKLLIEHIRQR 291