Pairwise Alignments

Query, 315 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  159 bits (403), Expect = 6e-44
 Identities = 91/293 (31%), Positives = 154/293 (52%), Gaps = 1/293 (0%)

Query: 5   RASQMALFAVLIQHQSFTAAAHALGVSVSHVSKQLAALEASLGVKLVQRTTRSFTLTDAG 64
           +A  + LF  ++   SF+  A  L ++ S VSK++A LE+ L V+L+ R+TR   LTDAG
Sbjct: 3   KADDIILFVNVVDEGSFSKVAQKLNLTNSVVSKRIARLESDLNVQLLYRSTRKLNLTDAG 62

Query: 65  NLFYAQCRELLTIVTNAQSEMEDQRDEVVGLIRLGLSQSFGTLHVLPALEQLRQQYPELN 124
              Y + R     + +A+  +    DEV G IR+ +      L +  A+ +    + E++
Sbjct: 63  RTLYNKARIANLAIQDAEDAVSGYSDEVRGKIRITMPNVSAKLVLNRAIAEFCNLHEEVD 122

Query: 125 VEVHLFDHKVDMLKEGLDLWITSNEQLPEGYVAQRIADCRFVVAASPDYLLRYGSPTEPM 184
           VE+ + +   ++++EG DL I +        +A+R+ D +++V ASP YL     P  P 
Sbjct: 123 VELAITNRVTNIIEEGYDLAIRTAHLEDSSLIAKRLIDSKWIVCASPTYLKNKSRPNHPD 182

Query: 185 ALMEHNCLIYRSWERDYTRWSFSRDGHNQTIKVAGNYSVDLAEAVRDAAVAGWGIAYLAT 244
            L EHNCLIY+        W F  +G    +++ G    +  +A+R AA+AG G+A+L  
Sbjct: 183 DLTEHNCLIYKYDSTGPDFWPFHIEGELHNVQIGGRIQSNNLDALRQAAIAGVGVAFLPK 242

Query: 245 YLLRDEFRTGQLIQLLPEWSANQQMPFYAVYPSRQHMPKKTSAVIEFIKQRLG 297
            L+ ++   G L  LL E+   + M  YAVYP  +   KK   ++ ++++  G
Sbjct: 243 ALVHEDIEDGALSPLLVEY-VTKTMGIYAVYPRSRQPDKKLKLLVNYLQEAFG 294