Pairwise Alignments

Query, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Putative nucleoside permease NupX from Escherichia coli ECRC62

 Score =  339 bits (870), Expect = 8e-98
 Identities = 170/413 (41%), Positives = 262/413 (63%), Gaps = 11/413 (2%)

Query: 4   VMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGA 63
           VM S+LGM  +L +A+L S N+K I+LRTV  AL+LQ+    ++L++P G+    +V   
Sbjct: 3   VMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFG 62

Query: 64  VSQLINYGQDGIGFVFGGLANGSV-------GFVFAINVLGIIIFFSALISGLYHLGIMP 116
           V +++ Y   G  F+FG L    +       GF+F   VL  IIF +AL+S LY++G+M 
Sbjct: 63  VHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMG 122

Query: 117 KVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLA 176
            +I ++GG  QK L   + ES  A   IF+G  E P +VKP++ ++  ++ F  +  G+A
Sbjct: 123 ILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSGMA 182

Query: 177 SVAGGTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKST 236
           S+AG T++GYA+LGV + YL+AA+ M+ P G+L A+++ P TE    +            
Sbjct: 183 SIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETPPK 242

Query: 237 NVVEAIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIE-LSFELIMGYVF 295
           +++EA A GAM+G+KIA  V   ++AFV++IAL+NG++G  GGWFG E  S E I+GY+ 
Sbjct: 243 SIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGYLL 302

Query: 296 APVAWLIGIPWHEAITAGSLIGNKVVVNEFVAFIQL---IEVKEQLSAHSQAIVTFALCG 352
           AP+AW++G+ W +A  AGSLIG K+ +NEFVA++     ++    L A + AI++FALCG
Sbjct: 303 APLAWVMGVDWTDANLAGSLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFALCG 362

Query: 353 FANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL 405
           FAN  ++ +++G   ++ P R   I+Q G RA+ A  L+NLMSA+IAG  + L
Sbjct: 363 FANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGL 415