Pairwise Alignments

Query, 405 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., putative nucleoside transporter from Escherichia coli BL21

 Score =  335 bits (859), Expect = 1e-96
 Identities = 171/413 (41%), Positives = 258/413 (62%), Gaps = 11/413 (2%)

Query: 4   VMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGA 63
           +M S++GM  +L +A+L S N+K+I+LRTV  ALLLQI    ++LY P GK A+ +    
Sbjct: 3   IMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAALG 62

Query: 64  VSQLINYGQDGIGFVFGGLANGSV-------GFVFAINVLGIIIFFSALISGLYHLGIMP 116
           V ++++Y   G  F+FG L    +       GF+FA  VL  IIF +ALIS LY++G+M 
Sbjct: 63  VHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGVMG 122

Query: 117 KVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLHKMTDSQFFAVMTGGLA 176
            +I ++G   QK L   + ES  A   IF+   E P +VKP++ +M  ++ F  +  G+A
Sbjct: 123 LLIRILGSIFQKALNISKIESFVAVTTIFLRQNEIPAIVKPFIDRMNRNELFTAICSGMA 182

Query: 177 SVAGGTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKST 236
           S+AG  ++GYA +GV ++YL+AA+ M+ P G+L A+I+ P TE                 
Sbjct: 183 SIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETPPK 242

Query: 237 NVVEAIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGI-ELSFELIMGYVF 295
           + +EA A GAM+G+KIA  V   ++AFV++IAL+NG++G  GGWFG    S E I GYV 
Sbjct: 243 SFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLESIFGYVL 302

Query: 296 APVAWLIGIPWHEAITAGSLIGNKVVVNEFVAFIQL---IEVKEQLSAHSQAIVTFALCG 352
           AP+AW++G+ W +A  AGSLIG K+ +NEFVA++     ++    L   + AI++FALCG
Sbjct: 303 APLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLSFSPYLQTGGTLEVKTIAIISFALCG 362

Query: 353 FANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAGVILSL 405
           FAN  ++ +++G   ++ P+R   I+Q G RA+ A  L+NLMSA+IAG  + L
Sbjct: 363 FANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGL 415