Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  153 bits (386), Expect = 6e-42
 Identities = 94/294 (31%), Positives = 150/294 (51%), Gaps = 3/294 (1%)

Query: 15  LNELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTT 74
           +++L  + IF +V+E GSF+  A  +  T+  +S+ + ALE  L  +L+ R+TR++SLT 
Sbjct: 1   MDKLNAMAIFVRVIERGSFSAVAREMQTTQPTISKILRALETELGGKLIARSTRQLSLTD 60

Query: 75  EGDTFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPK 134
           EG  +Y     +L   + A  S       ++G +RIG+++  G   +   L++F +QYP 
Sbjct: 61  EGQRYYSHCREILAAVDAAEHSFQTGKEAIAGPLRIGSSVSFGRLHIAARLSDFLQQYPD 120

Query: 135 VNFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINT 194
           V  D+QL+D LQD+V   LD+ +RIGEL  S L+ R I        AS  YL   P   T
Sbjct: 121 VQVDLQLNDHLQDMVSEGLDVTLRIGELRDSGLIARQIGTTHRVTLASPDYLARHPAPQT 180

Query: 195 IQDLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGS 254
             +L QH+ +    L+  NQ   +  +EG +  V+      SN+   V  MV  GLG+  
Sbjct: 181 PHELSQHNCLLFNLLSSQNQ--WVYEKEGTRQSVRITGNAQSNNSEAVREMVLTGLGIAL 238

Query: 255 IASFLI-DKLPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLVGTL 307
              +L  D L    +V L  D+   S  ++ +    +    RV+ F+DY+   L
Sbjct: 239 SPLWLFYDDLKAGRVVALLQDYTAQSLPIHAVSAPNRRQSARVKAFVDYMADAL 292