Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  144 bits (363), Expect = 3e-39
 Identities = 95/294 (32%), Positives = 150/294 (51%), Gaps = 6/294 (2%)

Query: 18  LKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGD 77
           L  + IF KVVE GSF+ AA  LG + S VS  I+ LEK L  RLL RTTRK+ L+  G+
Sbjct: 10  LGEMAIFVKVVETGSFSEAARQLGASPSSVSRSISRLEKALATRLLQRTTRKLRLSEGGE 69

Query: 78  TFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNF 137
             ++R   +++ A   +        E  G +R+     VG F+++P + EF ++YPKV+ 
Sbjct: 70  EVFKRCQEMVSAARSVMEISGQFTHEAEGLVRVSVPKAVGRFVVHPHMPEFLRRYPKVDV 129

Query: 138 DIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQD 197
            + L+D   D++D N+D+ IRI +     LVGR + P E  + A+  YL          D
Sbjct: 130 QLILEDRQVDMIDDNVDLSIRITDSPPPGLVGRQLLPIEHLLCATPQYLAAHGTPGHPHD 189

Query: 198 LEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIAS 257
           L  H  +YL     P  +     Q G    V    ++++N     +  V   +G+ S+  
Sbjct: 190 LLAHSCIYLG--ETPGDSRWKFRQAGKAVTVAVRGRYAANHTGVRLDAVLQHVGIASLPY 247

Query: 258 FLI-DKLPDASLVRLFPDFYQISTTMN---ILYPSRKNLPPRVRLFIDYLVGTL 307
           F     L +  LV++ P +  I++      +L+   + LPP++R+FIDYLV  +
Sbjct: 248 FTARHALEEGRLVQVLPAWDFIASYHGEAWLLHSPTRYLPPKLRVFIDYLVACM 301