Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  145 bits (367), Expect = 9e-40
 Identities = 100/287 (34%), Positives = 148/287 (51%), Gaps = 8/287 (2%)

Query: 23  IFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGDTFYQR 82
           ++ KVVE GS T AA+A GM+ + V   + ALE+ L V LL RTTRK SLT  G  +YQR
Sbjct: 9   VYVKVVETGSMTAAAQACGMSTTMVGNHLRALEQRLGVSLLKRTTRKQSLTEFGGQYYQR 68

Query: 83  SHGLLNIAEEALCSVNHLASEV-SGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNFDIQL 141
              +L +  ++        S+V  GT+RI      GT  L P L+EF ++YP +N  + L
Sbjct: 69  CLEVLGLVADSEQLAEQAHSDVPKGTLRITAPPVFGTERLTPALSEFSRRYPLINLYVVL 128

Query: 142 DDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQDLEQH 201
            +   DLVDS  D  IR+GEL +SSL+ R +  + L + AS  YL       T  DL+ H
Sbjct: 129 SNERMDLVDSGFDAAIRLGELETSSLIARPMQAYTLTLCASPDYLARRGTPQTPDDLQHH 188

Query: 202 D---WVYLTRLNL--PNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIA 256
           D   + Y    N    ++   +T + G + +V      + NS  G+     NG+G+  +A
Sbjct: 189 DCLAFAYPASDNWRDADKLWRMTGESG-EVEVPVSGSLTINSSQGLRQAAVNGMGIIMLA 247

Query: 257 SFLID-KLPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDY 302
             L+   L    LV L   +   S  M++LY   +   P++R F+D+
Sbjct: 248 DALVQPDLESGKLVALLTTYRLPSRPMHLLYGQDRYRLPKLRAFVDF 294