Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  141 bits (356), Expect = 2e-38
 Identities = 94/299 (31%), Positives = 147/299 (49%), Gaps = 2/299 (0%)

Query: 12  TVMLNELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKIS 71
           T  + +L  I +F +VV  GSF  AA  LG+  + +S +I  LE  L  RL+ R+TRK++
Sbjct: 3   TPSMLDLNDIAMFVQVVRYGSFAEAARRLGVPPNTLSRRIQQLESQLGTRLMQRSTRKLT 62

Query: 72  LTTEGDTFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQ 131
           LT+ G  F+ R  G ++    A   +       SG +R+  T D   F     +AEF + 
Sbjct: 63  LTSAGQDFHDRCAGAVDGLVAAGQELVAGGQAPSGLVRVAATADFFDFFPMEWVAEFLRT 122

Query: 132 YPKVNFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPP 191
           +P V  D  L D + DL+  N+D+  R G L+ SS V R +     G+ AS  Y+     
Sbjct: 123 HPLVRLDFVLSDAVVDLIAENIDIAFRGGPLSDSSYVARRLVTRSGGLLASPAYIAARGA 182

Query: 192 INTIQDLEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLG 251
             T+QDL  HD V     +  + T  LT  +G++ +V+   + + N+   +      GLG
Sbjct: 183 PTTLQDLAHHDCVTAAHPS-GHATWRLTGPDGMEEEVQVKGRFTGNTAQALRKATLAGLG 241

Query: 252 VGSIASFLIDKLPDAS-LVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLVGTLCG 309
           V  +   +      A  LV + P +      +N++YPSRK+LP  V  FI+ ++  L G
Sbjct: 242 VALLPPAMATSDEQAGLLVPVLPQYQYQGRGLNVVYPSRKHLPLAVSAFIELVIEKLEG 300