Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR substrate-binding domain-containing protein from Variovorax sp. OAS795

 Score =  140 bits (352), Expect = 5e-38
 Identities = 92/289 (31%), Positives = 145/289 (50%), Gaps = 2/289 (0%)

Query: 18  LKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGD 77
           L  I +F    E G FT AA A G+T + VS  I+ LEK L +RL  RTTR + LT  G 
Sbjct: 10  LGSIELFCLAAESGGFTSAALAAGVTPAAVSRSISRLEKRLGLRLFVRTTRSVRLTDAGR 69

Query: 78  TFYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNF 137
           T++ +    L    EA   V     + SGT+RI      G   + PLL  F ++YP +  
Sbjct: 70  TYFAQCRQALAQLAEAEREVMGQQMQPSGTLRISVPTTYGHHRILPLLPAFRERYPDIRL 129

Query: 138 DIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQD 197
            + L +   D V+   DM +R+     S+L+ R +   +L + A+  YL+ A    T+ D
Sbjct: 130 HVHLSNRNIDFVEEGYDMAVRVRAQPDSTLIARHLEDAQLVVVATLKYLKKAGTPRTLDD 189

Query: 198 LEQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHS-SNSPLGVMTMVQNGLGVGSIA 256
           L  H+ +     +   +   L  + G   +V   S +S S+  LG +T+ ++  G+    
Sbjct: 190 LAAHECIQFELPSSGRRISWLFRENGKDREVLADSAYSCSDDVLGGVTLAKSDAGLFQAY 249

Query: 257 SFLIDK-LPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLV 304
            F+++K L D SLV +   F   S    +LYP  +++P R+R+FID+L+
Sbjct: 250 RFVVEKELADGSLVEVLKPFAGRSRPYTLLYPDGRHVPLRMRVFIDFLM 298