Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  139 bits (351), Expect = 6e-38
 Identities = 95/287 (33%), Positives = 145/287 (50%), Gaps = 5/287 (1%)

Query: 19  KRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGDT 78
           + + IF  VVE GSF+ AAE LG   S VS  +  LE  L V LLNRTTR++SLT EG+ 
Sbjct: 6   EELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEGER 65

Query: 79  FYQRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNFD 138
           +++R   +L     A   +    +   G +RI     V    L PL+  F ++YP+V   
Sbjct: 66  YFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYPEVTLS 125

Query: 139 IQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQDL 198
           +   + + +L++  +D+ IR G LT SSL  R +      I AS  Y+       TI DL
Sbjct: 126 LVSSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPETIDDL 185

Query: 199 EQHDWVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIASF 258
           +QH  +  T     N T  +   +G  H+VK+    SSNS   +  +  +G G+  ++ +
Sbjct: 186 KQHICLGFTEPASLN-TWPIARSDGQLHEVKYGL--SSNSGETLKQLCLSGNGIACLSDY 242

Query: 259 LIDK-LPDASLVRLFPD-FYQISTTMNILYPSRKNLPPRVRLFIDYL 303
           +IDK +    LV L  D    +    + +Y S + +  R+R FID+L
Sbjct: 243 MIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFL 289