Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., D-malate degradation protein R from Alteromonas macleodii MIT1002

 Score =  179 bits (455), Expect = 6e-50
 Identities = 114/302 (37%), Positives = 166/302 (54%), Gaps = 17/302 (5%)

Query: 12  TVMLNELKRIVIFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKIS 71
           T+  + LK + IF  VVECGSF  AA  LG ++S+VSEQ+  LE +L+VRLL RTTR++ 
Sbjct: 3   TINYSHLKALAIFASVVECGSFAEAARRLGTSRSRVSEQVAGLEASLDVRLLQRTTRQLM 62

Query: 72  LTTEGDTFY---QRSHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEF 128
           LT EG+  +   ++ H +L+  +E L       +   G + I  T D+    L PLL EF
Sbjct: 63  LTDEGNAVFSHAKKCHEILHGIDEELRQ-----TAPKGRVSITVTNDIAHKFLLPLLPEF 117

Query: 129 YKQYPKVNFDIQLDDGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLEN 188
            ++YP+++  I   D   DL+  N+D+ +RIG     SLVGRV+   +  +YAS  YL+ 
Sbjct: 118 KRRYPEIDLHIVSSDDKLDLIAQNIDVGLRIGLPRDDSLVGRVLYQEQFALYASPDYLKK 177

Query: 189 APPINTIQDLEQHDWVYLTRLNLP-NQTLTLTNQEGVQHQVKFHSKHSS--NSPLGVMTM 245
                TI +L  H W+ L++LN      LTL N       +    KH    NSP  V  M
Sbjct: 178 YGEPKTIAELNNHTWILLSQLNSRIMHYLTLDNT-----PIDVTPKHYELCNSPHLVQEM 232

Query: 246 VQNGLGVGSIASFLIDK-LPDASLVRLFPDFYQISTTMNILYPSRKNLPPRVRLFIDYLV 304
           V+ GLG+ ++    + K +    L+R+FP     +    ++YPSRK++P R R  IDYLV
Sbjct: 233 VKAGLGISTLLPSTVQKEVASNELIRVFPSLGSETLLFTLVYPSRKHVPSRTRALIDYLV 292

Query: 305 GT 306
            T
Sbjct: 293 ET 294