Pairwise Alignments

Query, 309 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  140 bits (354), Expect = 3e-38
 Identities = 95/285 (33%), Positives = 152/285 (53%), Gaps = 7/285 (2%)

Query: 23  IFNKVVECGSFTCAAEALGMTKSKVSEQITALEKTLNVRLLNRTTRKISLTTEGDTFYQR 82
           +F  V   GS + AA+ LG + + +S++I  LE+ L  RL  RTTR+ISLT  G  FY+R
Sbjct: 9   VFASVAASGSMSLAAKELGYSPAVISKRIKRLEEKLGARLFQRTTRQISLTEAGQGFYER 68

Query: 83  SHGLLNIAEEALCSVNHLASEVSGTIRIGTTIDVGTFLLNPLLAEFYKQYPKVNFDIQLD 142
              +L   EEA   V+  A+ V+GT+++      G   + P L  F +++P ++ ++ L 
Sbjct: 69  VLAVLAGLEEAEDFVSGRANTVNGTLKVSAPTSFGRMHIAPHLKGFMERHPDLSVNLVLS 128

Query: 143 DGLQDLVDSNLDMVIRIGELTSSSLVGRVIAPFELGIYASQTYLENAPPINTIQDLEQHD 202
           D   D+++   D+ IRI +L SSSLV R +AP    + AS  Y+       TI+DL++H 
Sbjct: 129 DEFIDIIEGGYDLAIRIADLNSSSLVARRLAPVRRVLCASADYVVAHGMPATIEDLKKH- 187

Query: 203 WVYLTRLNLPNQTLTLTNQEGVQHQVKFHSKHSSNSPLGVMTMVQNGLGVGSIASFLI-D 261
                 L   N  +      G    ++      +NS   +   V +GLG+   +++ I  
Sbjct: 188 ----RCLPAHNNDIWRLEGPGGALSIRPEGMLVTNSSEVIREAVISGLGIALRSTWDIGH 243

Query: 262 KLPDASLVRLFPDFY-QISTTMNILYPSRKNLPPRVRLFIDYLVG 305
           +L    LV++ P +    + T++ +YPSR+ LP +VRLFIDYL G
Sbjct: 244 ELRSGKLVQVLPGYEGSRNVTLSAVYPSRQFLPAKVRLFIDYLAG 288