Pairwise Alignments

Query, 431 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., OpgC protein from Variovorax sp. SCN45

 Score =  107 bits (267), Expect = 6e-28
 Identities = 113/357 (31%), Positives = 162/357 (45%), Gaps = 63/357 (17%)

Query: 1   MKRIPALDSIRGLLLVLITFNHLIWYSGGTTILQMITHEPVGVFGAAEGFIFMSGLLAGM 60
           MKR   +D++RGL+LVL+T  HL       T L     +P G   AAEGF+ +S  +AG+
Sbjct: 1   MKRYWEIDALRGLMLVLMTVTHL------PTRLTDPLGQPFGFVSAAEGFVLLSAFVAGL 54

Query: 61  VYSRREYTD-----RQAAGKVWHRAFIIYKYHIAGL-FIAMLWFWLGSHYFAEQVTVFGG 114
           VYSR  +       RQA    W R   +Y    A L F+  +   LG H     V     
Sbjct: 55  VYSRIGFARGVDSMRQA---FWRRVLKVYLCQAAILLFLFTVIAALGLHIDQPAVKNLVS 111

Query: 115 SFSNLPTMPFMTMLMSFLLLNKPAYLEILPLYIMYMLLFPLAL-YGFRRGYLKWVLALSV 173
            +   P   F   +   LL+ +PA L+ILP+YI +ML+ P  L +  R G+  WV+A+S 
Sbjct: 112 YYLAEPREGF---IYGLLLIYEPALLDILPMYIFFMLMSPWVLAFAMRHGW-SWVMAVSA 167

Query: 174 LIWAS-----SGWIQGAMLLPLFKWLSAEYI------PELGYFDPFAWQLLFFFGGALGY 222
            +WA+     S W+ G         L+  Y+       E+G F+ +AWQ L+F G  +G 
Sbjct: 168 TVWAAAQFGLSEWVYG---------LAVHYLGVPVPFHEMGAFNTYAWQFLWFAGLCIG- 217

Query: 223 CKRQGELA---WFHPKLVWLCAAIALVIFMAYRDLLTPLGITKQMVYAAS-------SKP 272
             R G  A    F   L+ L A IAL     Y       GI  Q  +           K 
Sbjct: 218 ATRNGPGAKPLKFPAWLLLLAAGIAL-----YGLYWRHHGINGQAPFGGDVELNLLFDKW 272

Query: 273 ELGWLRVLSLSVWIYLISVVIRFFPTALVYEP----LSYLGRHSLQVFTWQTVLIFI 325
           +LG LR+++L   + L  + +RF P  +   P    L  +G  SL VF    V + +
Sbjct: 273 QLGPLRLVNL---VALGILAVRFGPWLMRRIPRMHWLEAMGSASLPVFCAHLVAVLL 326