Pairwise Alignments

Query, 431 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 87.4 bits (215), Expect = 7e-22
 Identities = 109/387 (28%), Positives = 166/387 (42%), Gaps = 58/387 (14%)

Query: 7   LDSIRGLLLVLITFNHLIWYSGGTTILQMITHEPVGVFGAAEGFIFMSGLLAGMVYSRRE 66
           LD  RGL L  I  NH+         +   T    G+  A E F+F+SG  A +VY R  
Sbjct: 25  LDFFRGLALWFIFVNHI-----PANQISWATPRNFGLSDATEIFVFISGYTAALVYGRT- 78

Query: 67  YTDRQ----AAGKVWHRAFIIYKYHIAGLF-----IAMLWFWLGSHYFAEQVTVFGGSFS 117
             DRQ    AA +V HR + +Y  +I   F     IA       S  FAE++ +  G F 
Sbjct: 79  -LDRQGMPMAAAQVLHRCWTLYATYIILFFAYTAQIAYTARAFDSPLFAEEMGI-AGYFQ 136

Query: 118 NLPTMPFMTMLMSFLLLNKPAYLEILPLYIMYMLLFPLALYGFRRGYLKWVLALSVLIWA 177
           +    P   +  + LL  +PA L++LPLYI+ +L   L L   RR  L  +   + L  A
Sbjct: 137 D----PVTALTQAILLKFRPANLDVLPLYIVLLLAMALLLPALRRRPLGVLAGSAALYLA 192

Query: 178 SSGWIQGAMLLPLFKWLSAEYIPELG--YFDPFAWQLLFFFGGALGY-CKRQGELAWFHP 234
           +  W      LP +        P+ G  YF+PF WQ LF  G +L +    +  L  F  
Sbjct: 193 ARQW---GWNLPTY--------PDGGVWYFNPFTWQFLFVLGASLQFQPDLRTTLTRFRR 241

Query: 235 KLVWLCAAIALV-IFM------AYRDLLTPLGITKQMVYAASSKPELGWLRVLSLSVWIY 287
            +     A+ L  +F+      A    L P+ +T+  +    SK +L  LR+L      Y
Sbjct: 242 PVAAAAGAVLLASLFLTLSWKFAPLHALIPVWLTE--ILYPISKTDLDPLRLLHFFALAY 299

Query: 288 LISVVIRFFPTAL---VYEPLSYLGRHSLQV--------FTWQTVLIFITAPWLLTTRDS 336
           L+  ++    + L   +  PL   G+ SL V        F  QTVL+ ++         +
Sbjct: 300 LVLWLVPAGASWLRGPLATPLLACGKQSLHVFCLGVLLSFAGQTVLVHVSGSLSAQFLVT 359

Query: 337 VWHTAIILLLCTTLWIPAWLQTQRKEK 363
           V   A+++L+   L    W Q+  + +
Sbjct: 360 VLGIAMMVLMARFL---NWYQSAERAR 383