Pairwise Alignments

Query, 206 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., neutral amino-acid efflux system (NCBI) from Escherichia coli BW25113

 Score = 81.3 bits (199), Expect = 1e-20
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 3/195 (1%)

Query: 9   FIPTFFFVSITPGMNMTLALTLGMSVGYRRTLWMMVGELLGVALVAVSAVVGIAAVMLRY 68
           ++ T   +S++PG      +T  ++ GYR  +  + G   G+A+  V   VG+  +  R 
Sbjct: 9   YLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRS 68

Query: 69  PDIFTLFKIVGASYLVYLGVQMWRSRGKLAINIEQENTYQGSDWGLLVQGFVTAIANPKG 128
              F + K  GA+YL++LG+Q WR+ G  AI+++   + Q S   L  +     + NPK 
Sbjct: 69  VIAFEVLKWAGAAYLIWLGIQQWRAAG--AIDLKSLASTQ-SRRHLFQRAVFVNLTNPKS 125

Query: 129 WAFMVSLLPPFIDQSLSLAPQLTVLVAIILLSEFISMSLYATGGKGLKRLLSQAHHVRLL 188
             F+ +L P FI        Q  VL    ++ + I M  YAT  + +   +     ++ L
Sbjct: 126 IVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKAL 185

Query: 189 NRIAGSLMAGVGIWL 203
           N+I GSL   VG  L
Sbjct: 186 NKIFGSLFMLVGALL 200