Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  202 bits (514), Expect = 8e-56
 Identities = 147/455 (32%), Positives = 231/455 (50%), Gaps = 34/455 (7%)

Query: 198  SYMTYRSADYQQF--LAWHDPLTRLKNRNFIVKKLK---KRRRNQQEPIALILFDLNRFK 252
            S ++ R A  Q+   LA++D LT L NR     +L    +    Q+  + L+  DL+RFK
Sbjct: 832  SDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFK 891

Query: 253  ELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGN--------- 303
             +ND++G+A GD++L  +A  L   C +     AR+G DEF +LL P             
Sbjct: 892  PINDSLGHAAGDRMLKEMATRLLG-CVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIH 950

Query: 304  -ADFFIRNLWNDLTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLAL 362
             A+  + +L        +E   T  + +A+       QD  E       S L+ NAD A+
Sbjct: 951  VAEQILASLVKPFVLEGREFFVTASIGIALS-----PQDGNE------LSQLMKNADTAM 999

Query: 363  NIAKKAPEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL- 421
              AK+  +    +Y  D+ ++  ++  L   L+  L    Q+   L YQP  S D  RL 
Sbjct: 1000 YHAKERGKNNFQFYQADMNASALERLELESDLRHAL---EQNEFVLYYQPQFSGDGKRLT 1056

Query: 422  GCEALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLD-V 480
            G EAL+RW+H   G + P   I + EE GL   +G W++ +    L+  W  +  R+  V
Sbjct: 1057 GAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQLKT-WHQNKVRVPKV 1115

Query: 481  SINLSNSLF-DETLPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKV 539
            S+N+S   F D  L T + TI          + LELTE++ + +  +++ I++SL+ + +
Sbjct: 1116 SVNISARQFSDGQLGTRIATILKDTGLPPACLELELTESILMREVNEAMQILDSLKNLGL 1175

Query: 540  RFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVV 599
              A+DDFGTG+SSL  L       LKID++FVD +   +Q A    +I+ ++H L + V+
Sbjct: 1176 SIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVI 1235

Query: 600  AEGIEQLAQLEQLKQLGVDEFQGYYFSRPITKTEF 634
            AEG+E   QL+ L++ G DE QGY F RP+    F
Sbjct: 1236 AEGVETHEQLDFLREHGCDEVQGYLFGRPMPANRF 1270