Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  191 bits (486), Expect = 7e-53
 Identities = 142/437 (32%), Positives = 225/437 (51%), Gaps = 39/437 (8%)

Query: 212 AWHDPLTRLKNRNFIVKKLKK-----RRRNQ---QEPIALILFDLNRFKELNDTMGYAFG 263
           A+ D LT L NR     +L+       R NQ   +E IA++  DL+ FK +ND+ G++ G
Sbjct: 220 AFTDALTGLPNRVLFEDRLRHALARMNRANQLQVEECIAVLFVDLDGFKPINDSFGHSAG 279

Query: 264 DQLLINIAELLTQRCRSFAYQCARIGADEFAVLLH------PCTGNADFFIRNL---WND 314
           D++L   AE L +  R  +   ARIG DEF +LL        C   A+  +R L   +N 
Sbjct: 280 DRILCVAAERLARNTRE-SDTVARIGGDEFLLLLEGVHDRAECAEAANRVLRALGEPFNV 338

Query: 315 LTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVV 374
             KL+Q       ++ ++G+V    Q             L+ NAD A+  AK+A  G  V
Sbjct: 339 QGKLLQ-------IACSIGIVLHPEQG--------EPDKLVANADAAMYEAKRAGGGNYV 383

Query: 375 YYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-GCEALIRWQHSE 433
            +   + +   K+  L   L++ + +  Q  LY  YQP ++   D + G EAL+RW H +
Sbjct: 384 MFESHMGADAAKQLQLQSDLRRAV-ELKQFELY--YQPKINGVGDSISGVEALVRWNHPQ 440

Query: 434 FGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLS-NSLFDET 492
            G I P   I +AE +GL   LG WI+ +    +   W+    ++ V++NLS   L +  
Sbjct: 441 HGLIGPTEFIGLAERFGLIVHLGDWILDEACRQIAQ-WQAQGTQMCVAVNLSVMQLREVD 499

Query: 493 LPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSS 552
               V      H    + ++ E+TE++ ++D   +   +E L ++ V  ++DDFGTG+SS
Sbjct: 500 FVARVERALLRHNVPASLLLCEITESVAMEDIKATQRTLEGLARVGVFLSIDDFGTGYSS 559

Query: 553 LYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQL 612
           L  L  L   ++KID+SFV ++   +     I +++ L+H LG+ VVAEG+E  AQ + L
Sbjct: 560 LSHLRKLPARQVKIDRSFVQDLQTKEDARAVIDAVIRLAHALGLSVVAEGVENEAQRDIL 619

Query: 613 KQLGVDEFQGYYFSRPI 629
             +G DE QG+ FSRP+
Sbjct: 620 LAMGCDELQGFLFSRPL 636