Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  190 bits (482), Expect = 3e-52
 Identities = 133/439 (30%), Positives = 222/439 (50%), Gaps = 15/439 (3%)

Query: 203  RSADYQQFLAWHDPLTRLKNRNFIVKKLK---KRRRNQQEPIALILFDLNRFKELNDTMG 259
            RS    +FLA HD LT L NR+  +++L    ++ + + + + ++  DL+RFK +ND++G
Sbjct: 616  RSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVGVLFIDLDRFKNINDSLG 675

Query: 260  YAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADFFIRNLWNDLTKLV 319
            +  GD LL ++A  ++Q  R      +R+G DEF V+L+      +         ++ + 
Sbjct: 676  HHVGDALLRSVAARMSQAVRP-GDTVSRLGGDEFVVVLNNVADGQEILSLVERRLISLIR 734

Query: 320  QENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRD 379
            Q +D    +  A   V+C               +L+ +AD+A+  +K +      ++T +
Sbjct: 735  QPHD----IDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASGRDTARFFTPE 790

Query: 380  IESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRLGC-EALIRWQHSEFGYIN 438
            +     ++  L   L+  +    +  L L YQP +      L C EAL+RWQ +E G + 
Sbjct: 791  MNERAQQRLQLESSLRHAI---ERDELSLHYQPRIDAHSGELICVEALLRWQSAELGQVR 847

Query: 439  PQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNR-RLDVSINLSN-SLFDETLPTL 496
            P   I IAEE G    +GAW+++Q   A    W+      + V+IN+S   L D  L  +
Sbjct: 848  PAQFIPIAEESGQIVAIGAWVIEQA-CAQHAAWRRDGLGAIRVAINMSALQLRDGGLLEV 906

Query: 497  VTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQL 556
            +      +      + +ELTE+  +D   QSL  + +L+ + V  ++DDFGTG+SSL  L
Sbjct: 907  LRGAIALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTGYSSLNYL 966

Query: 557  NHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLG 616
            N     KLKID+SF+  M  +        +I+ L H LG++VVAEG+E+  + + L+   
Sbjct: 967  NRFPIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEADTLRAAR 1026

Query: 617  VDEFQGYYFSRPITKTEFA 635
             DE QGY  SRP+   + A
Sbjct: 1027 CDELQGYLISRPMPAGKLA 1045