Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 766 a.a., Sensory box/GGDEF family protein from Sphingobium sp. HT1-2

 Score =  181 bits (460), Expect = 8e-50
 Identities = 135/465 (29%), Positives = 221/465 (47%), Gaps = 73/465 (15%)

Query: 204 SADYQQFLAWHDPLTRLKNRNFIVKKLKKRRR---NQQEPIALILFDLNRFKELNDTMGY 260
           SAD    LA  D LT L NR  +   L +      N++   A ++ DL+RFK +ND++G+
Sbjct: 328 SADKIAQLARFDTLTGLPNRAHLRDALDQAMADTGNRRPGCAFLMLDLDRFKAINDSLGH 387

Query: 261 AFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADFFIRNLWNDLTKLVQ 320
             GDQLL  +A+ L   C    + C RIG DEF V++                     + 
Sbjct: 388 QVGDQLLSQVAQRLRHVCGGAGF-CGRIGGDEFGVVI-------------------ARID 427

Query: 321 ENDPTKRLSVAMGVVTCQTQDFTESSSKLRAS--------------SLLNNADLALNIAK 366
           ++    RLS+A+           +    + AS              S++ +ADLAL  AK
Sbjct: 428 DDRAVARLSIAIIDALSAPYQIDQHVLHVGASVGSAVSPIDGHQSESIIRSADLALYRAK 487

Query: 367 KAPEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-GCEA 425
               G    Y   + +   +++ L + L++ L    +  L+L YQP++      + G EA
Sbjct: 488 DEGGGVHCPYEPQLHAKAEERQRLEQALREAL---EKDQLHLLYQPVVDATSGVITGFEA 544

Query: 426 LIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLS 485
           L RW H E G I P   + +AEE  L   +G W+++         W  H R   V++N+S
Sbjct: 545 LARWTHPELGPIPPSKFVPVAEEARLIGPIGEWVLRTACREAMR-WPAHIR---VAVNVS 600

Query: 486 NSLFDETLPTLVTTIFGHHENFLNAII--------------LELTETMTIDDFPQSLAII 531
                            H  NF++++I              LE+TE++ + +   +L ++
Sbjct: 601 AEQL-------------HQSNFISSVINALAQSGLDARRLELEVTESVFMHEDDGALRVL 647

Query: 532 ESLEKMKVRFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAI-FIASIVNL 590
           + L+ M ++ +LDDFGTG+SSL  L+  +F+ +KID+SFV     N  + +  I ++V L
Sbjct: 648 DQLQAMGIQLSLDDFGTGYSSLGYLSRTRFNTIKIDRSFVVGAAHNTPENLAIIRAVVTL 707

Query: 591 SHQLGMQVVAEGIEQLAQLEQLKQLGVDEFQGYYFSRPITKTEFA 635
           +  LGM   AEG+E   +L+ +++LG  + QGYY+ RP+   + A
Sbjct: 708 AESLGMSTTAEGVETATELDMVRRLGCKKVQGYYYGRPMLPQDAA 752