Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  201 bits (511), Expect = 1e-55
 Identities = 141/444 (31%), Positives = 226/444 (50%), Gaps = 40/444 (9%)

Query: 212 AWHDPLTRLKNRNFIVKKLKKRRRNQQE---PIALILFDLNRFKELNDTMGYAFGDQLLI 268
           A HD LT L NR  +  +L +  R+ ++    +A++  DL+ FK +ND++G+ FGDQ+LI
Sbjct: 309 ASHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMYIDLDGFKSINDSIGHYFGDQVLI 368

Query: 269 NIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADFFIRNLWNDLTKLVQENDPT--- 325
            +A+ LTQ+ R  A    R+G DEF VLL                  T L+++ D     
Sbjct: 369 EVAQRLTQQVRP-ADTVVRMGGDEFVVLL------------------TDLLRDEDAVPVA 409

Query: 326 KRLSVAMGVVTC-QTQDFTESSSK---------LRASSLLNNADLALNIAKKAPEGQVVY 375
           +RL  ++G   C Q  D   S+S           +   L+  AD+A+  AK+       +
Sbjct: 410 ERLLASIGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADMAMYKAKQQGRNNFQW 469

Query: 376 YTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQP-ILSRDPDRLGCEALIRWQHSEF 434
           YT D+     + R L   LQ+ +      S  L YQP I +R    +G EAL+RW+H   
Sbjct: 470 YTSDLNHRVCEHRSLRNDLQKAI---KTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVR 526

Query: 435 GYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLFD-ETL 493
           G+I+P   I +AE+ G    L  W++      L++        + +++N+S   F     
Sbjct: 527 GFISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQF 586

Query: 494 PTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSL 553
              +  +   H      + LE+TE++ + +  Q++A +  L+ + VR ALDDFGTG+SSL
Sbjct: 587 VECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSL 646

Query: 554 YQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLK 613
             L  L   K+KID+SF+ +++ N   A     I++++H L + VVAEG+E   Q+  L+
Sbjct: 647 SYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLE 706

Query: 614 QLGVDEFQGYYFSRPITKTEFATF 637
           +   D  QGYYF+RP++     TF
Sbjct: 707 RGRCDILQGYYFARPMSHEALRTF 730