Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  204 bits (518), Expect = 3e-56
 Identities = 141/435 (32%), Positives = 225/435 (51%), Gaps = 22/435 (5%)

Query: 211  LAWHDPLTRLKNRNFIVKKLK---KRRRNQQEPIALILFDLNRFKELNDTMGYAFGDQLL 267
            LA++D LT L NR     +L    ++   Q+  + L+  DL+RFK +ND++G+A GD++L
Sbjct: 840  LAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRML 899

Query: 268  INIAELLTQRCRSFAYQCARIGADEFAVLLHP------CTGNADFFIRNLWNDLTKLVQE 321
             ++A L    C       AR+G DEF +LL P          A     N+   L +    
Sbjct: 900  KDMA-LRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVL 958

Query: 322  NDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIE 381
             +    ++ ++G+     QD +E       S L+ NAD A+  AK+  +    +Y  ++ 
Sbjct: 959  ENREFFVTASIGIAL-SPQDGSE------LSQLMKNADTAMYHAKERGKNNFQFYQAEMN 1011

Query: 382  SAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-GCEALIRWQHSEFGYINPQ 440
            ++  ++  L   L+  +    Q+   L YQP  S D  RL G EAL+RW+H   G + P 
Sbjct: 1012 ASALERLELESDLRHAM---EQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPG 1068

Query: 441  YLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLF-DETLPTLVTT 499
              I + EE GL   +G W++++    L+   K   R   VS+N+S   F D  L T +  
Sbjct: 1069 DFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIAN 1128

Query: 500  IFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHL 559
            I          + LELTE++ + +  ++L I+ SL+ + +  A+DDFGTG+SSL  L   
Sbjct: 1129 ILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQF 1188

Query: 560  KFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDE 619
                LKID++FVD + + +Q A    +I+ ++H L + V+AEG+E   QLE L++ G DE
Sbjct: 1189 PIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDE 1248

Query: 620  FQGYYFSRPITKTEF 634
             QGY F RP+   +F
Sbjct: 1249 VQGYLFGRPMPAHQF 1263