Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  179 bits (454), Expect = 4e-49
 Identities = 149/456 (32%), Positives = 225/456 (49%), Gaps = 31/456 (6%)

Query: 194 LILLSYMTYRSADYQQ--FLAWHDPLTRLKNRNFIVKKLKK---RRRNQQEPIALILFDL 248
           ++LL  +T +  D Q+  F A HD LTRL NR+ +++ L +   R     E +A++  D+
Sbjct: 253 VLLLRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTGERLAVLYLDV 312

Query: 249 NRFKELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNADFFI 308
           NRFK++ND+ G+A GD+LL  +A  L + C   +    R+G DEF +LL P  G+     
Sbjct: 313 NRFKDINDSYGHAVGDELLRQVARRL-KACVRASDVIGRLGGDEFVMLL-PSVGD-HTAA 369

Query: 309 RNLWNDLTKLVQENDPTKRLSVAMGV---VTCQTQDFTESSSKLRASSLLNNADLALNIA 365
           +   N +     E    + L +  G    +     D         A SLL+ AD A+  A
Sbjct: 370 QACANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDAD------GAESLLSRADAAMYHA 423

Query: 366 KKAPEGQVVYYTRDIESAYNKKRILAEQL---QQLLLDPNQSSLYLSYQP-ILSRDPDRL 421
           K+   G + Y   DIE      R +AE++     L L   +    L YQP + +     +
Sbjct: 424 KR---GGLPYSCFDIE----MDRQVAERVSLENDLRLALGEDQFRLVYQPKVDALSGAII 476

Query: 422 GCEALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRL-DV 480
           G EALIRW+H     ++P   I +AE  GL   +  W++ +    +  +W+     L  +
Sbjct: 477 GAEALIRWRHPVRADVSPGLFIPVAERAGLIGAIDDWVLVEACRQVA-EWRAQGLILPSI 535

Query: 481 SINLSNSLF-DETLPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKV 539
           S+NLS + F D  L   V           + + LE+TETM   D  +++ I+  L  + V
Sbjct: 536 SVNLSPAQFHDGRLKEKVKAALAGSGLPPSVLELEITETMMASDVDRAIEILGQLTTLGV 595

Query: 540 RFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVV 599
           R +LDDFGTG+SSL  L     S LKID++FV  +  N +    IAS++ L+  LG  V+
Sbjct: 596 RVSLDDFGTGYSSLAYLKLFPVSTLKIDRAFVTELPGNAKDGAIIASVIALAGNLGFSVI 655

Query: 600 AEGIEQLAQLEQLKQLGVDEFQGYYFSRPITKTEFA 635
           AEG+E   Q   L   G    QG+ FSRP+    FA
Sbjct: 656 AEGVETREQAAFLAARGCPIMQGFLFSRPVNAATFA 691