Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 870 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Kangiella aquimarina DSM 16071

 Score =  194 bits (494), Expect = 1e-53
 Identities = 134/427 (31%), Positives = 224/427 (52%), Gaps = 20/427 (4%)

Query: 209 QFLAWHDPLTRLKNRNFIVKKLKK--RRRNQQEPIALILFDLNRFKELNDTMGYAFGDQL 266
           +F A HDPLT LKNR+ + + L +  +  +    I ++  DL+ FK +ND++G+ FGDQ+
Sbjct: 445 EFNASHDPLTHLKNRSALERYLMEWVKSNDNSHNIYILFIDLDGFKPINDSLGHEFGDQV 504

Query: 267 LINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGN--ADFFIRNLWNDLTKLVQENDP 324
           L+  A+ L           AR G DEF  ++   T +   +   R L   + +  + +D 
Sbjct: 505 LVETAQRLNNEIVE-PNMLARFGGDEFVAVIQDLTDHEQVEVLARKLLTIVGESYKVDDI 563

Query: 325 TKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALNIAKKAPEGQVVYYTRDIESAY 384
              LS A+G+ +      +E S K     L+  AD+A+  AKK     + +++ ++ +  
Sbjct: 564 EVSLSAAIGIAS------SEESFK-HPMELIQRADIAMYEAKKRGGSYIYWHSAELNTNI 616

Query: 385 NKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRLGCEALIRWQHSEFGYINPQYLIE 444
           +++  +  QLQ  + + NQ  L+  YQPI+S D    G EALIRW+H   GYI+P   I 
Sbjct: 617 DQQVAIRAQLQDAIQN-NQFELF--YQPIMSHDNKIGGVEALIRWKHPIKGYISPAEFIP 673

Query: 445 IAEEYGLGKKLGAWIMQQVYLALQNDWKPHNRRLDVSINLSNSLF--DETLPTLVTTIFG 502
           +AE  G    +  W++ Q    ++ D K       VS+N S   F  ++ +  +  T+  
Sbjct: 674 VAERTGQIIPISEWVLNQACKDVK-DLKTLGVN-SVSVNFSPIQFYREDFIEKIAETLKT 731

Query: 503 HHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKVRFALDDFGTGWSSLYQLNHLKFS 562
           H       I +E+TE + + D      +++ L  + +  A+DDFG+G++SL  LN L  +
Sbjct: 732 HSIQ-PGDITVEITENVLVHDTAHITVLLQELRHLGLDVAIDDFGSGFASLRYLNMLPVN 790

Query: 563 KLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVVAEGIEQLAQLEQLKQLGVDEFQG 622
           KLKID+SF  N++QN   A     I+ ++ ++ ++VVAEG+E   + + L++   D  QG
Sbjct: 791 KLKIDRSFTGNIHQNAHNAAITRGILGMTTEMKIEVVAEGVETDEEYQYLREHKCDFMQG 850

Query: 623 YYFSRPI 629
           Y F RPI
Sbjct: 851 YLFCRPI 857