Pairwise Alignments

Query, 655 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

 Score =  217 bits (552), Expect = 2e-60
 Identities = 181/629 (28%), Positives = 304/629 (48%), Gaps = 76/629 (12%)

Query: 47  LTKYTQLAAWSLAQLEVETLNFTHRLETYLLNGSRENHQAMSLNYDILWNRFDLFLTSKE 106
           LT+YT+  +WS+AQL  E   F   L  Y  +        + +  +I+ ++ DL     +
Sbjct: 33  LTQYTE--SWSVAQLVSEYYRFESWLGLYATDTDDVTIDQVRMRLEIMLSQSDLM----K 86

Query: 107 TQELRQQHDAQAIIQEVFTQLKRY----ELAVSRGDQPVLQELLQLLEPYNAQIRNLAIV 162
             +L +  D+    QE+  +L++     +  + +   P LQ  L  +   +A +  L+  
Sbjct: 87  GGDLGRYIDSDKAHQELALRLEKILTYLDSHLEKMSHPELQAYLTNMHDLDAPLSQLSAT 146

Query: 163 NFTGESANSNIRMINENK---QQLLYFFAAILLMLILLSYMTYRSADYQ----------- 208
             T      +I  +NE+    Q L Y ++A+ L+L++LS++      YQ           
Sbjct: 147 ALT-----KDINTVNESNHKIQILYYIYSALSLLLVILSFILGFLMIYQNKNILKAHMQV 201

Query: 209 ---------------------QFLAWHDPLTRLKNRNFI---VKKLKKRRRNQQEPIALI 244
                                ++  +HD LT +KNR F    + K+  +      P+ ++
Sbjct: 202 KSLADELQISKETLQIQNSKLEYDVYHDSLTGMKNRLFFWDDLNKINLQADKNHIPVTVM 261

Query: 245 LFDLNRFKELNDTMGYAFGDQLLINIAELLTQRCRSFAYQCARIGADEFAVLLHPCTGNA 304
           LFDL+RFKE+NDT G+  GD LL  ++  LT    S      R+G DEFA+L    T  A
Sbjct: 262 LFDLDRFKEVNDTYGHDAGDLLLNQVSRRLTSMS-SATDTFYRLGGDEFALLSSGLTETA 320

Query: 305 DFF-IRNLWNDLTKLVQENDPTKRLSVAMGVVTCQTQDFTESSSKLRASSLLNNADLALN 363
                + +   +++    N+   +++  +G+V         S ++ R+  L   ADLAL 
Sbjct: 321 AVSRAKEISEHISQPYTINNQLIKIATCVGIVL--------SDNERRSDYLYKFADLALY 372

Query: 364 IAKKAPEGQVVYYTRDIESAYNKKRILAEQLQQLLLDPNQSSLYLSYQPILSRDPDRL-G 422
            AKK    Q+  + + +     + R L   +  L +D ++  +Y  YQPI+    + + G
Sbjct: 373 EAKKEGSQQIKVFRQWMLQKLQESRTLEHDMA-LAIDNHEFVVY--YQPIVDSFSNEIYG 429

Query: 423 CEALIRWQHSEFGYINPQYLIEIAEEYGLGKKLGAWIMQQVYLALQN--DWKPHNRRLDV 480
            EALIRW H   G ++P Y I +AE+ G+  ++G  +++   LA +    W    R   +
Sbjct: 430 YEALIRWIHPVKGILSPDYFISVAEKTGMINQIGKNVLE---LACREAVSWAVPAR---I 483

Query: 481 SINLSN-SLFDETLPTLVTTIFGHHENFLNAIILELTETMTIDDFPQSLAIIESLEKMKV 539
           S+N+S   L  ++   +V +I        N + LE+TE+    D    L I++ L  + V
Sbjct: 484 SVNVSPVQLGTKSFTAMVQSILKETGLPANRLELEVTESSLFSDSNTPLTILKKLRTLGV 543

Query: 540 RFALDDFGTGWSSLYQLNHLKFSKLKIDKSFVDNMNQNQQQAIFIASIVNLSHQLGMQVV 599
           R ++DDFGTG+SSL +L+ L F K+KIDKSFV+ ++        +  I  ++  L M+V+
Sbjct: 544 RISIDDFGTGYSSLSRLSELNFDKIKIDKSFVNPISTQDDALNIVKLITGMAKSLNMRVI 603

Query: 600 AEGIEQLAQLEQLKQLGVDEFQGYYFSRP 628
           AEG+E  AQLE+L+ LG D  QGY F +P
Sbjct: 604 AEGVETEAQLERLQALGCDLVQGYLFGKP 632